RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TGFB1P01137 390 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 PRPS2P11908 318 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 GRIA3P42263 894 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 UFM1P61960 85 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 CYP4F2P78329 520 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 MXRA7P84157 204 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 TBL3Q12788 808 aaKnown RBP20.76■□□□□ 0.91
SMC4-221ENST00000489573 CUL3Q13618 768 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SPIN4Q56A73 249 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 ARMC6Q6NXE6 501 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SPESP1Q6UW49 350 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 PAQR7Q86WK9 346 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 PLD3Q8IV08 490 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 KIF2BQ8N4N8 673 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SLC38A3Q99624 504 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 BTBD10Q9BSF8 475 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SLC25A23Q9BV35 468 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 SARGQ9BW04 601 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 MRPL1Q9BYD6 325 aaKnown RBP20.76■□□□□ 0.91
SMC4-221ENST00000489573 ANKMY1Q9P2S6 941 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 RUVBL1Q9Y265 456 aaKnown RBP20.76■□□□□ 0.91
SMC4-221ENST00000489573 DLGAP4Q9Y2H0 992 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 KLHL20Q9Y2M5 609 aa20.76■□□□□ 0.91
SMC4-221ENST00000489573 RRP15Q9Y3B9 282 aaKnown RBP20.76■□□□□ 0.91
SMC4-221ENST00000489573 NR5A2O00482 541 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 ANKRD28O15084 1053 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 GYG2O15488 501 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 NRP2O60462 931 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 MYO1DO94832 1006 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 BCKDHAP12694 445 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 PCSK2P16519 638 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 PTX3P26022 381 aaPredicted RBP20.75■□□□□ 0.91
SMC4-221ENST00000489573 GSTM2P28161 218 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 BCL6P41182 706 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 NOXRED1Q6NXP6 359 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 KLHL35Q6PF15 583 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 FAM9CQ8IZT9 166 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 C1orf52Q8N6N3 182 aaKnown RBP20.75■□□□□ 0.91
SMC4-221ENST00000489573 ARL10Q8N8L6 244 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 RBM15BQ8NDT2 890 aaKnown RBP20.75■□□□□ 0.91
SMC4-221ENST00000489573 CHTF18Q8WVB6 975 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 RSC1A1Q92681 617 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 SLC45A3Q96JT2 553 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 TEX37Q96LM6 180 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 LRFN3Q9BTN0 628 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 OR51B5Q9H339 312 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 ACTL8Q9H568 366 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 TAS2R1Q9NYW7 299 aa20.75■□□□□ 0.91
SMC4-221ENST00000489573 KNL1Q8NG31 2342 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 YKT6O15498 198 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 ZW10O43264 779 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 LCMT2O60294 686 aaKnown RBP20.74■□□□□ 0.91
SMC4-221ENST00000489573 DFNA5O60443 496 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 UBXN7O94888 489 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 JAK1P23458 1154 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 STX5Q13190 355 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 HLA-BQ31612 363 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 FBXO27Q8NI29 283 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 PROKR1Q8TCW9 393 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 RCN3Q96D15 328 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 C11orf24Q96F05 449 aaPredicted RBP20.74■□□□□ 0.91
SMC4-221ENST00000489573 MS4A8Q9BY19 250 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 C1orf21Q9H246 121 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 CAPN10Q9HC96 672 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 FSCN3Q9NQT6 498 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 TMEM131Q92545 1883 aa20.74■□□□□ 0.91
SMC4-221ENST00000489573 A0A0J9YY10 115 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 FAM234BA2RU67 622 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 CFAP73A6NFT4 308 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 TNFSF14O43557 240 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 CLEC3AO75596 197 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 GIMD1P0DJR0 217 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 TYRP1P17643 537 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 SDC1P18827 310 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 MAGP20916 626 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 AHRP35869 848 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 CORO7P57737 925 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 KCNK10P57789 538 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 RCAN2Q14206 197 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 PTGR1Q14914 329 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 BLOC1S3Q6QNY0 202 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 MFSD9Q8NBP5 474 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 TSPEARQ8WU66 669 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 ZBTB18Q99592 522 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 EBPLQ9BY08 206 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 DPY30Q9C005 99 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 SIRT5Q9NXA8 310 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 KLK4Q9Y5K2 254 aa20.73■□□□□ 0.91
SMC4-221ENST00000489573 OR2A25A4D2G3 310 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 RHPN2P1A8MT19 583 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 BBIP1A8MTZ0 92 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 C9JVG2 144 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 AIM2O14862 343 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 SEMA3DO95025 777 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 PROS1P07225 676 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 IL12AP29459 219 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 TIA1P31483 386 aaKnown RBP eCLIP20.72■□□□□ 0.912e-7■■■□□ 18.7
SMC4-221ENST00000489573 CAPZBP47756 277 aa20.72■□□□□ 0.91
SMC4-221ENST00000489573 ZFP36L2P47974 494 aaKnown RBP20.72■□□□□ 0.91
SMC4-221ENST00000489573 NUDT2P50583 147 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms