RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 AVPR1BP47901 424 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 EEF1A2Q05639 463 aaKnown RBP21.82■■□□□ 1.08
COL9A3-213ENST00000489045 PDIA2Q13087 525 aaKnown RBP21.82■■□□□ 1.08
COL9A3-213ENST00000489045 FRG1Q14331 258 aaKnown RBP21.82■■□□□ 1.08
COL9A3-213ENST00000489045 FASTKD3Q14CZ7 662 aaKnown RBP21.82■■□□□ 1.08
COL9A3-213ENST00000489045 FHL5Q5TD97 284 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 CAPN13Q6MZZ7 669 aaPredicted RBP21.82■■□□□ 1.08
COL9A3-213ENST00000489045 PRSS41Q7RTY9 318 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 FBXO36Q8NEA4 188 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 OR9A4Q8NGU2 314 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 THAP11Q96EK4 314 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 KRT12Q99456 494 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 MACROD1Q9BQ69 325 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 EPS8L2Q9H6S3 715 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 ZFATQ9P243 1243 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 PCDHGA10Q9Y5H3 936 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 PSAT1Q9Y617 370 aa21.82■■□□□ 1.08
COL9A3-213ENST00000489045 CPAMD8Q8IZJ3 1885 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 SPTBN1Q01082 2364 aaKnown RBP21.81■■□□□ 1.08
COL9A3-213ENST00000489045 NAV2Q8IVL1 2488 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 BCL6P41182 706 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 GLRBP48167 497 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 MGAT5Q09328 741 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 ZXDCQ2QGD7 858 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-213ENST00000489045 CRB2Q5IJ48 1285 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 NDUFAF7Q7L592 441 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 KBTBD2Q8IY47 623 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 PYCR2Q96C36 320 aa21.81■■□□□ 1.08
COL9A3-213ENST00000489045 NOVA2Q9UNW9 492 aaKnown RBP21.81■■□□□ 1.08
COL9A3-213ENST00000489045 IGHV1-45A0A0A0MS14 117 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 A0A1W2PQ72 361 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 BLACEA4D250 179 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 LCMT2O60294 686 aaKnown RBP21.8■■□□□ 1.08
COL9A3-213ENST00000489045 AGFG2O95081 481 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 NSA2O95478 260 aaKnown RBP21.8■■□□□ 1.08
COL9A3-213ENST00000489045 NPPBP16860 134 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 IL1RNP18510 177 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 RPL21P46778 160 aaKnown RBP21.8■■□□□ 1.08
COL9A3-213ENST00000489045 EFNA3P52797 238 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 AP1S2P56377 157 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 NR6A1Q15406 480 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 DUPD1Q68J44 220 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 TMEM214Q6NUQ4 689 aaKnown RBP21.8■■□□□ 1.08
COL9A3-213ENST00000489045 ISLR2Q6UXK2 745 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 LINC00696Q6ZRV3 163 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 CAMKVQ8NCB2 501 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 OR56A3Q8NH54 315 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 ZCCHC10Q8TBK6 192 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 DNAJB14Q8TBM8 379 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 TM4SF19Q96DZ7 209 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 HAUS8Q9BT25 410 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 TRIM54Q9BYV2 358 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 RNF14Q9UBS8 474 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 IKZF3Q9UKT9 509 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 MKL2Q9ULH7 1088 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 NTNG1Q9Y2I2 539 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 SNX24Q9Y343 169 aa21.8■■□□□ 1.08
COL9A3-213ENST00000489045 E7ESA3 106 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 H0YIG0 161 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 KLHL18O94889 574 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 GUCA1CO95843 209 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 SAT1P21673 171 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 GRK3P35626 688 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 MRPS25P82663 173 aaKnown RBP21.79■■□□□ 1.08
COL9A3-213ENST00000489045 MFAP5Q13361 173 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 EIF2S3LQ2VIR3 472 aaKnown RBP21.79■■□□□ 1.08
COL9A3-213ENST00000489045 TMEM207Q6UWW9 146 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 STRA8Q7Z7C7 330 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 ASPGQ86U10 573 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 SLC26A11Q86WA9 606 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 SHISA5Q8N114 240 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 FBXL8Q96CD0 374 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 CNDP1Q96KN2 507 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 RIC8BQ9NVN3 520 aa21.79■■□□□ 1.08
COL9A3-213ENST00000489045 COPG1Q9Y678 874 aaKnown RBP21.79■■□□□ 1.08
COL9A3-213ENST00000489045 PCDH17O14917 1159 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 JRKO75564 520 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 BMP10O95393 424 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 ENO2P09104 434 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-213ENST00000489045 PRR35P0CG20 571 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 ZNF37AP17032 561 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-213ENST00000489045 MEF2AQ02078 507 aaPredicted RBP21.78■■□□□ 1.08
COL9A3-213ENST00000489045 TMEM205Q6UW68 189 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 SBSNQ6UWP8 590 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 ZC3HC1Q86WB0 502 aaKnown RBP21.78■■□□□ 1.08
COL9A3-213ENST00000489045 ZBED8Q8IZ13 594 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 MFSD9Q8NBP5 474 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 KCT2Q8NC54 265 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 BRIX1Q8TDN6 353 aaKnown RBP21.78■■□□□ 1.08
COL9A3-213ENST00000489045 SLC13A3Q8WWT9 602 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 ATL1Q8WXF7 558 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 PDLIM5Q96HC4 596 aaKnown RBP21.78■■□□□ 1.08
COL9A3-213ENST00000489045 PSMG3-AS1Q96PY0 264 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 OR4K3Q96R72 315 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 MOCS1Q9NZB8 636 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 HCN3Q9P1Z3 774 aa21.78■■□□□ 1.08
COL9A3-213ENST00000489045 LOC102723996A0A087X1L8 192 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 FAM95CA0A1B0GW59 222 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 SGK494L7N484 410 aa21.77■■□□□ 1.08
COL9A3-213ENST00000489045 SEMA7AO75326 666 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms