RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 ATG4AQ8WYN0 398 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 LPGAT1Q92604 370 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 FAM136AQ96C01 138 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 CCDC138Q96M89 665 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 HCN3Q9P1Z3 774 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 PPT2Q9UMR5 302 aa14.45□□□□□ -0.1
MCF2L-228ENST00000487354 SOWAHDA6NJG2 315 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 E7ENX8 843 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 KPNA5O15131 536 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 NME2P1O60361 137 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 MLYCDO95822 493 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 TSPAN12O95859 305 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 SLC16A8O95907 504 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 CD46P15529 392 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 NME2P22392 152 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 PPARGP37231 505 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-228ENST00000487354 XCR1P46094 333 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 PNLIPRP1P54315 467 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 CRADDP78560 199 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 RHAGQ02094 409 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 TAP2Q03519 686 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 KCNJ11Q14654 390 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 ARHGAP19Q14CB8 494 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 ANKRD20A4Q4UJ75 823 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 ACSBG2Q5FVE4 666 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 SLC25A25Q6KCM7 469 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 PPP1R21Q6ZMI0 780 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 PCGF5Q86SE9 256 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 LRRC6Q86X45 466 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 MMP21Q8N119 569 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 MPP5Q8N3R9 675 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 RPRMLQ8N4K4 120 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 OR51Q1Q8NH59 317 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 GSDMBQ8TAX9 411 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 MAGEC3Q8TD91 643 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 ZNF480Q8WV37 535 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 RERGQ96A58 199 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-228ENST00000487354 MRFAP1L1Q96HT8 127 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 FOPNLQ96NB1 174 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 MACROD1Q9BQ69 325 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 LACRTQ9GZZ8 138 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 CXXC4Q9H2H0 198 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 LANCL2Q9NS86 450 aa14.44□□□□□ -0.1
MCF2L-228ENST00000487354 C19orf25Q9UFG5 118 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-228ENST00000487354 PACSIN2Q9UNF0 486 aaPredicted RBP14.44□□□□□ -0.1
MCF2L-228ENST00000487354 NKX2-6A6NCS4 301 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 TXNDC9O14530 226 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 SLC25A12O75746 678 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 TOXO94900 526 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 PKMP14618 531 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 ETS1P14921 441 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 ZNF24P17028 368 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 IL1RNP18510 177 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 NMBRP28336 390 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 MSX1P28360 303 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 DNAJA1P31689 397 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 ANP32AP39687 249 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 AVPR1BP47901 424 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 NR0B1P51843 470 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 PTK6Q13882 451 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 USP10Q14694 798 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 EXT1Q16394 746 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 TYSND1Q2T9J0 566 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 SFT2D3Q587I9 215 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 TMEM214Q6NUQ4 689 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 PAPD4Q6PIY7 484 aaKnown RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 DMRTC2Q8IXT2 367 aaPredicted RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 LGI4Q8N135 537 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 KIF2BQ8N4N8 673 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 TSLPQ969D9 159 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 SLC30A3Q99726 388 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 OLFM1Q99784 485 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 TRIM45Q9H8W5 580 aaPredicted RBP14.43□□□□□ -0.1
MCF2L-228ENST00000487354 LRFN1Q9P244 771 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 SH2B3Q9UQQ2 575 aa14.43□□□□□ -0.1
MCF2L-228ENST00000487354 ABCA4P78363 2273 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 GOLGA6L9A6NEM1 432 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 BTNL10A8MVZ5 291 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 SGK494L7N484 410 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 PRRG2O14669 202 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 NADKO95544 446 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-228ENST00000487354 TPP2P29144 1249 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-228ENST00000487354 FMO4P31512 558 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 FDFT1P37268 417 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 BCL6P41182 706 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 AGTR2P50052 363 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 SLC26A5P58743 744 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 TSTA3Q13630 321 aaPredicted RBP14.42□□□□□ -0.1
MCF2L-228ENST00000487354 KLHL38Q2WGJ6 581 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 MFSD4BQ5TF39 518 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 CD163Q86VB7 1156 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 CCDC170Q8IYT3 715 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 PPHLN1Q8NEY8 458 aaKnown RBP14.42□□□□□ -0.1
MCF2L-228ENST00000487354 GIMAP7Q8NHV1 300 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 FAM57AQ8TBR7 257 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 ELP5Q8TE02 316 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 RBCK1Q9BYM8 510 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 UCK2Q9BZX2 261 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 ANAPC5Q9UJX4 755 aa14.42□□□□□ -0.1
MCF2L-228ENST00000487354 MED16Q9Y2X0 877 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms