RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 L3MBTL4Q8NA19 623 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 ZNF740Q8NDX6 193 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 UBE2E3Q969T4 207 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 RERGQ96A58 199 aaPredicted RBP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 SEC16BQ96JE7 1060 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 NSUN5Q96P11 429 aaKnown RBP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 SPRTNQ9H040 489 aaPredicted RBP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 SYNPO2LQ9H987 977 aa18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 TMEM184BQ9Y519 407 aaPredicted RBP18.52■□□□□ 0.56
PCOLCE-208ENST00000487172 HMGB1P1B2RPK0 211 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 TIAF1O95411 115 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 CLDN9O95484 217 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 BPGMP07738 259 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 CTSBP07858 339 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 CD22P20273 847 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 ALDH3A1P30838 453 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 CCNG1P51959 295 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 NAGLUP54802 743 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 CDH13P55290 713 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 VSX2P58304 361 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 FOXK2Q01167 660 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 CYP4F3Q08477 520 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 GRM7Q14831 915 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 HIST2H2ACQ16777 129 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 PRTGQ2VWP7 1150 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 TTMPQ5BVD1 217 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 HIST2H2AA3Q6FI13 130 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 GRHL2Q6ISB3 625 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 VN1R4Q7Z5H5 301 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 TTLQ8NG68 377 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 OR52B6Q8NGF0 335 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 ATP6V1E2Q96A05 226 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 MAGEB10Q96LZ2 347 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 GSTO2Q9H4Y5 243 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 ACTR8Q9H981 624 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 SEMA4BQ9NPR2 832 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 FOXJ2Q9P0K8 574 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 ZFP69BQ9UJL9 534 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 ZNF490Q9ULM2 529 aaPredicted RBP18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 STK38LQ9Y2H1 464 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 TSC22D4Q9Y3Q8 395 aa18.51■□□□□ 0.55
PCOLCE-208ENST00000487172 TMEM120BA0PK00 339 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 BIRC5O15392 142 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 ZSCAN9O15535 394 aaPredicted RBP18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 SCRG1O75711 98 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 MLYCDO95822 493 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 OTCP00480 354 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 HBQ1P09105 142 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 SERPINB4P48594 390 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 ARSFP54793 590 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 TRAF3Q13114 568 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 TBC1D25Q3MII6 688 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 GGTA1PQ4G0N0 100 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 RPS27LQ71UM5 84 aaKnown RBP18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 ASPGQ86U10 573 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 TMEM126BQ8IUX1 230 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 LAS2Q8IYD9 372 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 ZNF655Q8N720 491 aaPredicted RBP18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 ANKRD53Q8N9V6 530 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 TTC29Q8NA56 475 aaPredicted RBP18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 CAMKVQ8NCB2 501 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 TRPV3Q8NET8 790 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 TRPC4APQ8TEL6 797 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 LRFN5Q96NI6 719 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 RHBGQ9H310 441 aa18.5■□□□□ 0.55
PCOLCE-208ENST00000487172 H0YIV9 168 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 H3BQF6 201 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 DYNC1I1O14576 645 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 ZNF749O43361 778 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 STK17BO94768 372 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 DLGAP3O95886 979 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 CAPNS1P04632 268 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 ZNF28P17035 718 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 PWP1Q13610 501 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 MAP7Q14244 749 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 RBBP5Q15291 538 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 FAM214AQ32MH5 1076 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 GARNL3Q5VVW2 1013 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 MED27Q6P2C8 311 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 MILR1Q7Z6M3 343 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 CSNK1A1LQ8N752 337 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 CCNYL1Q8N7R7 359 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 SLC13A3Q8WWT9 602 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 SREK1Q8WXA9 508 aaKnown RBP18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 MOCOSQ96EN8 888 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 CNDP1Q96KN2 507 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 ZNF382Q96SR6 550 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 GATA5Q9BWX5 397 aaPredicted RBP18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 NLNQ9BYT8 704 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 ACTR5Q9H9F9 607 aaPredicted RBP18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 IRAK4Q9NWZ3 460 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 SRPK3Q9UPE1 567 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 RNF11Q9Y3C5 154 aa18.49■□□□□ 0.55
PCOLCE-208ENST00000487172 HYKKA2RU49 373 aa18.48■□□□□ 0.55
PCOLCE-208ENST00000487172 PPP6CO00743 305 aa18.48■□□□□ 0.55
PCOLCE-208ENST00000487172 NPHS1O60500 1241 aa18.48■□□□□ 0.55
PCOLCE-208ENST00000487172 CPNE3O75131 537 aaKnown RBP18.48■□□□□ 0.55
PCOLCE-208ENST00000487172 CLEC3AO75596 197 aa18.48■□□□□ 0.55
PCOLCE-208ENST00000487172 KIAA0754O94854 1291 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms