RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SOX11P35716 441 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 RPS15AP62244 130 aaKnown RBP23.25■■□□□ 1.31
LIME1-206ENST00000487026 PHKG1Q16816 387 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 TMEM205Q6UW68 189 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 MYO1HQ8N1T3 1032 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 FAR1Q8WVX9 515 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 ZNF700Q9H0M5 742 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 PLAC1Q9HBJ0 212 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 HCN3Q9P1Z3 774 aa23.25■■□□□ 1.31
LIME1-206ENST00000487026 NOTCH2Q04721 2471 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 LOC102723996A0A087X1L8 192 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 A0A1W2PQ72 361 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 OR2W5A6NFC9 320 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 SGK494L7N484 410 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 E2F3O00716 465 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 CES2O00748 559 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 TTC4O95801 387 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 UQCRHP07919 91 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 ITGAMP11215 1152 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 CDH1P12830 882 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 IL1RNP18510 177 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 BCL6P41182 706 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 MFSD4BQ5TF39 518 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 LRRC8EQ6NSJ5 796 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 C17orf64Q86WR6 236 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 KCT2Q8NC54 265 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 ZCCHC10Q8TBK6 192 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 MAGEB10Q96LZ2 347 aaPredicted RBP23.24■■□□□ 1.31
LIME1-206ENST00000487026 VN1R1Q9GZP7 353 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 PCBD2Q9H0N5 130 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 PPANQ9NQ55 473 aaKnown RBP23.24■■□□□ 1.31
LIME1-206ENST00000487026 RIC8BQ9NVN3 520 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 OSGIN2Q9Y236 505 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 POLEQ07864 2286 aa23.24■■□□□ 1.31
LIME1-206ENST00000487026 SCN3AQ9NY46 2000 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 IGHV3-20A0A0C4DH32 117 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 H0YIG0 161 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 C8orf89P0DMQ9 161 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 IVDP26440 423 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 ZXDCQ2QGD7 858 aaPredicted RBP23.23■■□□□ 1.31
LIME1-206ENST00000487026 LANCL3Q6ZV70 420 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 PCGF5Q86SE9 256 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 SLC26A11Q86WA9 606 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 CNTN4Q8IWV2 1026 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 OR51Q1Q8NH59 317 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 GABPB2Q8TAK5 448 aaPredicted RBP23.23■■□□□ 1.31
LIME1-206ENST00000487026 TM4SF19Q96DZ7 209 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 CERS2Q96G23 380 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 CFAP36Q96G28 342 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 KCNF1Q9H3M0 494 aa23.23■■□□□ 1.31
LIME1-206ENST00000487026 CENPEQ02224 2701 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 DYTNA2CJ06 578 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 SLC16A5O15375 505 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 NSA2O95478 260 aaKnown RBP23.22■■□□□ 1.31
LIME1-206ENST00000487026 TSPAN12O95859 305 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 NPPBP16860 134 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 FDXRP22570 491 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 ELK3P41970 407 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 TNFSF10P50591 281 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 MEF2AQ02078 507 aaPredicted RBP23.22■■□□□ 1.31
LIME1-206ENST00000487026 SP140Q13342 867 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 MINDY4Q4G0A6 757 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 TEDDM1Q5T9Z0 273 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 TMEM214Q6NUQ4 689 aaKnown RBP23.22■■□□□ 1.31
LIME1-206ENST00000487026 MAMDC2Q7Z304 686 aaPredicted RBP23.22■■□□□ 1.31
LIME1-206ENST00000487026 SLC13A3Q8WWT9 602 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 METTL21AQ8WXB1 218 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 HAS2Q92819 552 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 PYCR2Q96C36 320 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 CAPZA3Q96KX2 299 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 IMMP1LQ96LU5 166 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 CYTH2Q99418 400 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 NAT9Q9BTE0 207 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 SGPP1Q9BX95 441 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 CHMP2BQ9UQN3 213 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 SVILO95425 2214 aa23.22■■□□□ 1.31
LIME1-206ENST00000487026 PCDH17O14917 1159 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 HIST1H2AGP0C0S8 130 aaPredicted RBP23.21■■□□□ 1.31
LIME1-206ENST00000487026 EDN3P14138 238 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 HIST1H2ADP20671 130 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 XCR1P46094 333 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 IL2P60568 153 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 PDAP1Q13442 181 aaKnown RBP23.21■■□□□ 1.31
LIME1-206ENST00000487026 HECTD2Q5U5R9 776 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 CAPN13Q6MZZ7 669 aaPredicted RBP23.21■■□□□ 1.31
LIME1-206ENST00000487026 RPUSD3Q6P087 351 aaKnown RBP23.21■■□□□ 1.31
LIME1-206ENST00000487026 TRMT10BQ6PF06 316 aaKnown RBP23.21■■□□□ 1.31
LIME1-206ENST00000487026 FAM180AQ6UWF9 173 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 LCTLQ6UWM7 567 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 RIPOR1Q6ZS17 1223 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 KIAA0408Q6ZU52 694 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 ASPGQ86U10 573 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 PDSS2Q86YH6 399 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 KLHL7Q8IXQ5 586 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 GPATCH11Q8N954 259 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 CAMKVQ8NCB2 501 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 SLCO2A1Q92959 643 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 THAP11Q96EK4 314 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 HIST1H2AHQ96KK5 128 aa23.21■■□□□ 1.31
LIME1-206ENST00000487026 HIST1H2AJQ99878 128 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms