RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 GP5P40197 560 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 BUD31P41223 144 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 HSPA7P48741 367 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CCR9P51686 369 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PGDP52209 483 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 NDST2P52849 883 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CDK3Q00526 305 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 HHEXQ03014 270 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 FOXM1Q08050 763 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 EPS8Q12929 822 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CNN3Q15417 329 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 TIGD6Q17RP2 521 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 C2CD6Q53TS8 623 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 C1orf185Q5T7R7 199 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 RAET1GQ6H3X3 334 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 TUBA3EQ6PEY2 450 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 SLC22A25Q6T423 547 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 NPNTQ6UXI9 565 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PLXDC1Q8IUK5 500 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PSTKQ8IV42 348 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 MCATQ8IVS2 390 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 SFRP1Q8N474 314 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CCDC185Q8N715 623 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 LPCAT1Q8NF37 534 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CDC26Q8NHZ8 85 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 SLC37A2Q8TED4 501 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 METTL21AQ8WXB1 218 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 GATAD2BQ8WXI9 593 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CPA5Q8WXQ8 436 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 SPACA9Q96E40 222 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 MOCOSQ96EN8 888 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 STAMBPL1Q96FJ0 436 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PDLIM5Q96HC4 596 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 EIF3CQ99613 913 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 TM9SF2Q99805 663 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CINPQ9BW66 212 aaPredicted RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 MAGEB5Q9BZ81 275 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 VPS16Q9H269 839 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CENPHQ9H3R5 247 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CLK4Q9HAZ1 481 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 APMAPQ9HDC9 416 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 DECR2Q9NUI1 292 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 B4GALT6Q9UBX8 382 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 NEU3Q9UQ49 428 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 ZDHHC9Q9Y397 364 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 CORINQ9Y5Q5 1042 aa6.59□□□□□ -1.35
HDAC3-209ENST00000486618 MRPS18BQ9Y676 258 aaKnown RBP6.59□□□□□ -1.35
HDAC3-209ENST00000486618 PRRC2CQ9Y520 2896 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 TRBV23OR9-2A0A075B6M9 112 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 C15orf38-AP3S2A0A0A6YYH1 394 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 C2CD4BA6NLJ0 364 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 TARM1B6A8C7 271 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 J3KR12 359 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 PSMD11O00231 422 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 DDX3XO00571 662 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 LSM1O15116 133 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 HDAC3O15379 428 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 KLHL2O95198 593 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ANKRD34CP0C6C1 535 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 PNMA6AP0CW24 399 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 KRT3P12035 628 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 GM2AP17900 193 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 F8A1P23610 371 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CASP14P31944 242 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 VIPR1P32241 457 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 HTR7P34969 479 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ARL3P36405 182 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SERPINF1P36955 418 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CETN2P41208 172 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 GARSP41250 739 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 KIR3DL1P43629 444 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 GPR1P46091 355 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 PPP5CP53041 499 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 AIF1P55008 147 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 AP1S1P61966 158 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 NOMO3P69849 1222 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ABATP80404 500 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 OCRLQ01968 901 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ASPHQ12797 758 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 TRIM25Q14258 630 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 IL11RAQ14626 422 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 RFTN1Q14699 578 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 INPP5JQ15735 1006 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 MPEG1Q2M385 716 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 EIF2S3LQ2VIR3 472 aaKnown RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 PYCR3Q53H96 274 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 RAB6CQ53S08 254 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 NAA35Q5VZE5 725 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 DENND2CQ68D51 928 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SCYL2Q6P3W7 929 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 CYB5D1Q6P9G0 228 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 DOK6Q6PKX4 331 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 RANBP10Q6VN20 620 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 TAS2R42Q7RTR8 314 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF761Q86XN6 746 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-209ENST00000486618 ZNF677Q86XU0 584 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 HPS6Q86YV9 775 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 RASGRP3Q8IV61 690 aa6.58□□□□□ -1.36
HDAC3-209ENST00000486618 SLC34A3Q8N130 599 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms