RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ME2P23368 584 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 FOXM1Q08050 763 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 CYP2A13Q16696 494 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 ENPP7Q6UWV6 458 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 RETREG3Q86VR2 466 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 DCP2Q8IU60 420 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 LIX1Q8N485 282 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 UBE2E3Q969T4 207 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 INSM2Q96T92 566 aaPredicted RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 RAB11FIP5Q9BXF6 653 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 DPY30Q9C005 99 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 PCBD2Q9H0N5 130 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 ACTL8Q9H568 366 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 ADA2Q9NZK5 511 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 VPS29Q9UBQ0 182 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 PCOLCE2Q9UKZ9 415 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 WDR37Q9Y2I8 494 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 PDZK1P1A8MUH7 402 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 TRIM38O00635 465 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 KDM1AO60341 852 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 FKBP6O75344 327 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 PSMG1O95456 288 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 NPPAP01160 153 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 VARSP26640 1264 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 IL12AP29459 219 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 GRK6P43250 576 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 RABIFP47224 123 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 RXRGP48443 463 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 THOP1P52888 689 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 SIM1P81133 766 aaPredicted RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 TRIP6Q15654 476 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 SUSD1Q6UWL2 747 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 OR7G3Q8NG95 312 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 SMPDL3AQ92484 453 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 CCDC124Q96CT7 223 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 IL17FQ96PD4 163 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 MVB12BQ9H7P6 319 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 HEBP2Q9Y5Z4 205 aa14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 CFAP20Q9Y6A4 193 aaKnown RBP14.05□□□□□ -0.16
POLR2J3-204ENST00000486319 SPAARA0A1B0GVQ0 90 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 C9JVG2 144 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 CBFA2T3O75081 653 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 BCKDHAP12694 445 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 AMD1P17707 334 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 CEACAM7Q14002 265 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 KRT33BQ14525 404 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 SHBQ15464 509 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 SAMD4BQ5PRF9 694 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 AAGABQ6PD74 315 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 NXPE4Q6UWF7 544 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 GATAD2AQ86YP4 633 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 LAS2Q8IYD9 372 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 SLC22A18ASQ8N1D0 253 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 SAP25Q8TEE9 199 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 OR1E3Q8WZA6 343 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 LRRC58Q96CX6 371 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 CDC6Q99741 560 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 MENTQ9BUN1 341 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 IMP3Q9NV31 184 aaKnown RBP14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 NMRK1Q9NWW6 199 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 TMEM181Q9P2C4 612 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 PLAGL1Q9UM63 463 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 BTBD3Q9Y2F9 522 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 PLEKHM1Q9Y4G2 1056 aa14.04□□□□□ -0.16
POLR2J3-204ENST00000486319 MYO1DO94832 1006 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 IL6P05231 212 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 PCNAP12004 261 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 CLNS1AP54105 237 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 CLDN8P56748 225 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 AP2B1P63010 937 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 PHEXP78562 749 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 BNIP3Q12983 259 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 DDX39BQ13838 428 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 NFYCQ13952 458 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 SLBPQ14493 270 aaKnown RBP eCLIP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 PTGR1Q14914 329 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 TLR1Q15399 786 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 SPATS1Q496A3 300 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 TIGD2Q4W5G0 525 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 DUS1LQ6P1R4 473 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 WASH2PQ6VEQ5 465 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 C17orf64Q86WR6 236 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 KRT78Q8N1N4 520 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 DPP10Q8N608 796 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 EFCAB3Q8N7B9 438 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 VPS33AQ96AX1 596 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 SH3KBP1Q96B97 665 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 PDXPQ96GD0 296 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 APIPQ96GX9 242 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 FCRL1Q96LA6 429 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 MTERF1Q99551 399 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 PELI2Q9HAT8 420 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 WASH6PQ9NQA3 447 aa14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 GEMIN8Q9NWZ8 242 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 SUCOQ9UBS9 1254 aaKnown RBP14.03□□□□□ -0.16
POLR2J3-204ENST00000486319 RUVBL1Q9Y265 456 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms