RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 GALNT16Q8N428 558 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 SPATA6LQ8N4H0 392 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 CLEC1AQ8NC01 280 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 OR4K1Q8NGD4 311 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 FBF1Q8TES7 1133 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 MIB2Q96AX9 1013 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 SMAD5Q99717 465 aaKnown RBP18.57■□□□□ 0.56
SNX5-213ENST00000486039 CRB3Q9BUF7 120 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 DRC3Q9H069 523 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 TXNDC16Q9P2K2 825 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 TRPC4Q9UBN4 977 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 CTNNAL1Q9UBT7 734 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 FBXL4Q9UKA2 621 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 PLAAQ9Y263 795 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 ZNF451Q9Y4E5 1061 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 OARD1Q9Y530 152 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 ANKRD12Q6UB98 2062 aa18.57■□□□□ 0.56
SNX5-213ENST00000486039 SPENQ96T58 3664 aaKnown RBP18.56■□□□□ 0.56
SNX5-213ENST00000486039 ALOX12BO75342 701 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 FAM155BO75949 473 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 ANXA5P08758 320 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 SLC12A2P55011 1212 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 SOX8P57073 446 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 RBBP7Q16576 425 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 NDUFA9Q16795 377 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 SYT16Q17RD7 645 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 NADK2Q4G0N4 442 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 CATSPEREQ5SY80 951 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 PRSS41Q7RTY9 318 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 SHISA5Q8N114 240 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 MMGT1Q8N4V1 131 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 PPM1NQ8N819 430 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 MFSD9Q8NBP5 474 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 NEIL2Q969S2 332 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 SARGQ9BW04 601 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 YIPF2Q9BWQ6 316 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 DERL2Q9GZP9 239 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 ZNF552Q9H707 407 aaPredicted RBP18.56■□□□□ 0.56
SNX5-213ENST00000486039 ATP13A2Q9NQ11 1180 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 C3orf18Q9UK00 162 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 G3BP2Q9UN86 482 aaKnown RBP18.56■□□□□ 0.56
SNX5-213ENST00000486039 MAP4K5Q9Y4K4 846 aa18.56■□□□□ 0.56
SNX5-213ENST00000486039 PRPF4O43172 522 aaKnown RBP eCLIP18.55■□□□□ 0.561e-17■■■□□ 17.2
SNX5-213ENST00000486039 GRK3P35626 688 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 CD97P48960 835 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 CCR8P51685 355 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 MLLT10P55197 1068 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 MAT1AQ00266 395 aaKnown RBP18.55■□□□□ 0.56
SNX5-213ENST00000486039 SRSF1Q07955 248 aaKnown RBP eCLIP18.55■□□□□ 0.567e-16■■■□□ 14.7
SNX5-213ENST00000486039 MYBPC3Q14896 1274 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 EFTUD2Q15029 972 aaKnown RBP eCLIP18.55■□□□□ 0.563e-20■■■□□ 17.4
SNX5-213ENST00000486039 ZKSCAN8Q15776 578 aaPredicted RBP18.55■□□□□ 0.56
SNX5-213ENST00000486039 GRTP1Q5TC63 336 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 TMEM214Q6NUQ4 689 aaKnown RBP18.55■□□□□ 0.56
SNX5-213ENST00000486039 ADAMTSL2Q86TH1 951 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 ASPGQ86U10 573 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 THOC6Q86W42 341 aaKnown RBP18.55■□□□□ 0.56
SNX5-213ENST00000486039 KCT2Q8NC54 265 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 NOA1Q8NC60 698 aaKnown RBP18.55■□□□□ 0.56
SNX5-213ENST00000486039 CAMKVQ8NCB2 501 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 OR11G2Q8NGC1 345 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 OR9A4Q8NGU2 314 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 SLC13A3Q8WWT9 602 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 SLC5A11Q8WWX8 675 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 TSPAN17Q96FV3 270 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 TSNARE1Q96NA8 513 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 EGFL8Q99944 293 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 TGIF2Q9GZN2 237 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 SPNS1Q9H2V7 528 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 DMGDHQ9UI17 866 aaKnown RBP18.55■□□□□ 0.56
SNX5-213ENST00000486039 SLC22A14Q9Y267 594 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 PTPN13Q12923 2485 aa18.55■□□□□ 0.56
SNX5-213ENST00000486039 CLEC18AA5D8T8 446 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 CCDC166P0CW27 439 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 CD1DP15813 335 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 STMN1P16949 149 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 STX2P32856 288 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 SPRP35270 261 aaPredicted RBP18.54■□□□□ 0.56
SNX5-213ENST00000486039 AVPR1BP47901 424 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 AIMP2Q13155 320 aaKnown RBP18.54■□□□□ 0.56
SNX5-213ENST00000486039 CSHL1Q14406 222 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 C18orf21Q32NC0 220 aaPredicted RBP18.54■□□□□ 0.56
SNX5-213ENST00000486039 VWA5B1Q5TIE3 1220 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 ATG9BQ674R7 924 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 CLEC18BQ6UXF7 455 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 RBMXL3Q8N7X1 1067 aaKnown RBP18.54■□□□□ 0.56
SNX5-213ENST00000486039 CLEC18CQ8NCF0 446 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 ZNF740Q8NDX6 193 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 RHBDF1Q96CC6 855 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 MKKSQ9NPJ1 570 aaPredicted RBP18.54■□□□□ 0.56
SNX5-213ENST00000486039 COL12A1Q99715 3063 aa18.54■□□□□ 0.56
SNX5-213ENST00000486039 NBASA2RRP1 2371 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 IDSB3KWA1 339 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 H0YIG0 161 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 OR1F1O43749 312 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 DPM1O60762 260 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 NSA2O95478 260 aaKnown RBP18.53■□□□□ 0.56
SNX5-213ENST00000486039 IL1RNP18510 177 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 GMPRP36959 345 aa18.53■□□□□ 0.56
SNX5-213ENST00000486039 GDF5P43026 501 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms