RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	CHST11	Q9NPF2	352 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	IARS2	Q9NSE4	1012 aa	Known RBP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	OLAH	Q9NV23	265 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	PTGFRN	Q9P2B2	879 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	SH3BGRL2	Q9UJC5	107 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	CDC14A	Q9UNH5	594 aa		10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	NIPBL	Q6KC79	2804 aa	eCLIP	10.04	□□□□□ -0.8
HMGN1-215	ENST00000485550	TRGV8	A0A0C4DH27	118 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF839	A8K0R7	811 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	IDS	B3KWA1	339 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	HAT1	O14929	419 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	P2RX6	O15547	441 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	FOXS1	O43638	330 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	CCNDBP1	O95273	360 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	UQCRH	P07919	91 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	CELA2A	P08217	269 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	ANXA5	P08758	320 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	MPC1L	P0DKB6	136 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	COX6A1	P12074	109 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	MLN	P12872	115 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	SRSF11	Q05519	484 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	NAA25	Q14CX7	972 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	LONRF1	Q17RB8	773 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF425	Q6IV72	752 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	UBE2R2	Q712K3	238 aa	Predicted RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	NDUFAF7	Q7L592	441 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	KBTBD2	Q8IY47	623 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	LRRC56	Q8IYG6	542 aa	Predicted RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	SIRT6	Q8N6T7	355 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	OR1N1	Q8NGS0	311 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	CD200R1	Q8TD46	325 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	BRIX1	Q8TDN6	353 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	KCNJ9	Q92806	393 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	ALKBH8	Q96BT7	664 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	PBK	Q96KB5	322 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	SIGLEC10	Q96LC7	697 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	NDN	Q99608	321 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	XAB2	Q9HCS7	855 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	UTP6	Q9NYH9	597 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	SUCO	Q9UBS9	1254 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	FBXO5	Q9UKT4	447 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	DHRS7	Q9Y394	339 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	MRPS2	Q9Y399	296 aa	Known RBP	10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	ACAN	P16112	2415 aa		10.03	□□□□□ -0.8
HMGN1-215	ENST00000485550	PRRC2A	P48634	2157 aa	Known RBP	10.02	□□□□□ -0.8
HMGN1-215	ENST00000485550	IGLV3-12	A0A075B6K2	115 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	C19orf84	I3L1E1	186 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	GFY	I3L273	518 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	CCL21	O00585	134 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	PRPF4	O43172	522 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	BANF1	O75531	89 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	PRR35	P0CG20	571 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	EZR	P15311	586 aa	Known RBP	10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	IMPA1	P29218	277 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	SLC26A3	P40879	764 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	TDGF1P3	P51864	188 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	ARG2	P78540	354 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	ABAT	P80404	500 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	MFAP5	Q13361	173 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	TLR1	Q15399	786 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	B3GNTL1	Q67FW5	361 aa	Predicted RBP	10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	MBOAT1	Q6ZNC8	495 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	NEK10	Q6ZWH5	1172 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	CDH24	Q86UP0	819 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	MMP21	Q8N119	569 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	BCORP1	Q8N888	145 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	AMER3	Q8N944	861 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	NAT8L	Q8N9F0	302 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	OR9A4	Q8NGU2	314 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	COG1	Q8WTW3	980 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	PSMF1	Q92530	271 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	LMF1	Q96S06	567 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	AARSD1	Q9BTE6	412 aa	Known RBP	10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	DRC3	Q9H069	523 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	ATG10	Q9H0Y0	220 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	ADAMTS6	Q9UKP5	1117 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	MKL2	Q9ULH7	1088 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	NEU2	Q9Y3R4	380 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	JRKL	Q9Y4A0	524 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	AKAP6	Q13023	2319 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	SCN2A	Q99250	2005 aa		10.02	□□□□□ -0.81
HMGN1-215	ENST00000485550	ABCA2	Q9BZC7	2435 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	IGHV1-45	A0A0A0MS14	117 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	IGHV3-20	A0A0C4DH32	117 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	FEZF1	A0PJY2	475 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	OR2W5	A6NFC9	320 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	PGRMC1	O00264	195 aa	Known RBP	10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	NRDC	O43847	1150 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	PHF2	O75151	1096 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	WFS1	O76024	890 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	NADK	O95544	446 aa	Predicted RBP	10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	ENO3	P13929	434 aa	Predicted RBP	10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	SSTR2	P30874	369 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	MAGEA3	P43357	314 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	EFNA3	P52797	238 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	PGGT1B	P53609	377 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	CYP1B1	Q16678	543 aa		10.01	□□□□□ -0.81
HMGN1-215	ENST00000485550	NDUFA9	Q16795	377 aa		10.01	□□□□□ -0.81

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