RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 DLGAP3O95886 979 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 EPB42P16452 691 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 IRF8Q02556 426 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 CLN3Q13286 438 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 ZC3H12BQ5HYM0 836 aaKnown RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 CCT6BQ92526 530 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 RERGQ96A58 199 aaPredicted RBP11.34□□□□□ -0.59
APTX-227ENST00000485479 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 SPRY4Q9C004 299 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 IPPKQ9H8X2 491 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
APTX-227ENST00000485479 ANKRD11Q6UB99 2663 aaPredicted RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 A0A0G2JN53 185 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 LOC101059948A0A1B0GTJ6 334 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 C4orf51C9J302 202 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 OR7A17O14581 309 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 RAD1O60671 282 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 CPNE3O75131 537 aaKnown RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 SUPT7LO94864 414 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 GSTA1P08263 222 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 MYZAPP0CAP1 466 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 C1GALT1C1LP0DN25 315 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 MYL2P10916 166 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 IL1RNP18510 177 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 WT1P19544 449 aaPredicted RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 F8A1P23610 371 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 GRK3P35626 688 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 OR1D4P47884 311 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 RPS18P62269 152 aaKnown RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 REEP5Q00765 189 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 DDX39BQ13838 428 aaKnown RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 PCLAFQ15004 111 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 PCBP2Q15366 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
APTX-227ENST00000485479 CDKL4Q5MAI5 379 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 IGF2-ASQ6U949 168 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 LRIG3Q6UXM1 1119 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 ZCCHC23Q6ZST2 131 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 C10orf107Q8IVU9 208 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 CCNYL1Q8N7R7 359 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 OR4K1Q8NGD4 311 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 TRPC4APQ8TEL6 797 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 NKD1Q969G9 470 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 PKNOX2Q96KN3 472 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 TEFMQ96QE5 360 aaKnown RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 HBEGFQ99075 208 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 ARGLU1Q9NWB6 273 aaPredicted RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 PLLPQ9Y342 182 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 RNF11Q9Y3C5 154 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 TMEM184BQ9Y519 407 aaPredicted RBP11.33□□□□□ -0.6
APTX-227ENST00000485479 NBEAQ8NFP9 2946 aa11.33□□□□□ -0.6
APTX-227ENST00000485479 ZNF860A6NHJ4 632 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 TYROBPO43914 113 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 FKBP9O95302 570 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 RPS17P08708 135 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 MSL3P1P0C860 447 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 LIPCP11150 499 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ITGAXP20702 1163 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ATP5F1P24539 256 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 FOXK2Q01167 660 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 MPP2Q14168 576 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 RBBP7Q16576 425 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 CPSF6Q16630 551 aaKnown RBP eCLIP11.32□□□□□ -0.6
APTX-227ENST00000485479 SYT16Q17RD7 645 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 UNC50Q53HI1 259 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ZNF678Q5SXM1 525 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ATG9BQ674R7 924 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 C6orf15Q6UXA7 325 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 ZYG11AQ6WRX3 759 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 DTX1Q86Y01 620 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 KLHDC8AQ8IYD2 350 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 NLGN4XQ8N0W4 816 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 NLGN4YQ8NFZ3 816 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 SLC13A3Q8WWT9 602 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 MR1Q95460 341 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ATP6V1E2Q96A05 226 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 NDC1Q9BTX1 674 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 AICDAQ9GZX7 198 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 CHRNA10Q9GZZ6 450 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 CHST8Q9H2A9 424 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 ACTR8Q9H981 624 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 SCN2AQ99250 2005 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 BOD1L1Q8NFC6 3051 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 A0A0A6YYC8 382 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 HYKKA2RU49 373 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 WDR91A4D1P6 747 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 STX16-NPEPL1H3BU86 382 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 I3L1I5 382 aaPredicted RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 MEN1O00255 615 aa11.32□□□□□ -0.6
APTX-227ENST00000485479 SAP18O00422 153 aaKnown RBP11.32□□□□□ -0.6
APTX-227ENST00000485479 STX16O14662 325 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms