RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SERPINB3P29508 390 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 PLA2G5P39877 138 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 GABRA4P48169 554 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 KRT6CP48668 564 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 RPL14P50914 215 aaKnown RBP16.82■□□□□ 0.28
CHMP3-207ENST00000485465 CLDN6P56747 220 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 IFT88Q13099 833 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 KCNAB1Q14722 419 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 UGT3A2Q3SY77 523 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 TCHHL1Q5QJ38 904 aaPredicted RBP16.82■□□□□ 0.28
CHMP3-207ENST00000485465 HES3Q5TGS1 186 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 KANK2Q63ZY3 851 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 FRG2Q64ET8 278 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 FAM47EQ6ZV65 393 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 CRLF3Q8IUI8 442 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 MCATQ8IVS2 390 aaKnown RBP16.82■□□□□ 0.28
CHMP3-207ENST00000485465 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.82■□□□□ 0.28
CHMP3-207ENST00000485465 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 CHCHD4Q8N4Q1 142 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 ANKRD53Q8N9V6 530 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 TTLQ8NG68 377 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 WDR20Q8TBZ3 569 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 DEPDC7Q96QD5 511 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 FRG2BQ96QU4 278 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 OR2A5Q96R48 311 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 RHBGQ9H310 441 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 ELOVL6Q9H5J4 265 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 SYNPO2LQ9H987 977 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 PLCL2Q9UPR0 1127 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 FIS1Q9Y3D6 152 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 TSC22D4Q9Y3Q8 395 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 PCDHGA4Q9Y5G9 962 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 AP1M2Q9Y6Q5 423 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 UNC13CQ8NB66 2214 aa16.82■□□□□ 0.28
CHMP3-207ENST00000485465 COL27A1Q8IZC6 1860 aaPredicted RBP16.82■□□□□ 0.28
CHMP3-207ENST00000485465 HCRTR1O43613 425 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 CSO75390 466 aaKnown RBP16.81■□□□□ 0.28
CHMP3-207ENST00000485465 FOLR1P15328 257 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 GSTM2P28161 218 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 SERPINB1P30740 379 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 CSTF2P33240 577 aaKnown RBP eCLIP16.81■□□□□ 0.28
CHMP3-207ENST00000485465 AHRP35869 848 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 NEK2P51955 445 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 C16orf72Q14CZ0 275 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 ISXQ2M1V0 245 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 DEFB110Q30KQ9 67 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 FRMPD2BQ6IN97 320 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 ADNP2Q6IQ32 1131 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 MTERF4Q7Z6M4 381 aaKnown RBP16.81■□□□□ 0.28
CHMP3-207ENST00000485465 HOMEZQ8IX15 550 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 MTFMTQ96DP5 389 aaKnown RBP16.81■□□□□ 0.28
CHMP3-207ENST00000485465 SEC16BQ96JE7 1060 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 STRADBQ9C0K7 418 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 ADGRE2Q9UHX3 823 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 ZFP69BQ9UJL9 534 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 CLCA2Q9UQC9 943 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 PCNX2A6NKB5 2137 aa16.81■□□□□ 0.28
CHMP3-207ENST00000485465 LOC105369274A0A096LPK9 316 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 LOC102723532A0A0G2JNH3 316 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 DCDC2BA2VCK2 349 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 ANKDD1BA6NHY2 528 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 H0YGG7 62 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 SRPX2O60687 465 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 EDF1O60869 148 aaKnown RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 ULK1O75385 1050 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 SNRNP200O75643 2136 aaKnown RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 CHEK2O96017 543 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 VIMP08670 466 aaKnown RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 MSL3P1P0C860 447 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 PIK3CBP42338 1070 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 HTR6P50406 440 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 ARF3P61204 181 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 GNGT1P63211 74 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 SGO1Q5FBB7 561 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 C10orf62Q5T681 223 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 VN1R5Q7Z5H4 357 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 VN1R4Q7Z5H5 301 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 OR4N4Q8N0Y3 316 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 CACTIN-AS1Q8N1I8 211 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 AFAP1L2Q8N4X5 818 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 AGBL5Q8NDL9 886 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 HUS1BQ8NHY5 278 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 PIWIL2Q8TC59 973 aaKnown RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 CREB3L4Q8TEY5 395 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 SELENOMQ8WWX9 145 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 USP7Q93009 1102 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 RERGQ96A58 199 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 FAR2Q96K12 515 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 ZNF317Q96PQ6 595 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 FARSBQ9NSD9 589 aaKnown RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 MARCOQ9UEW3 520 aaPredicted RBP16.8■□□□□ 0.28
CHMP3-207ENST00000485465 DNAJC15Q9Y5T4 150 aa16.8■□□□□ 0.28
CHMP3-207ENST00000485465 AGRPO00253 132 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 FOXE1O00358 373 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 CLEC3AO75596 197 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 PDYNP01213 254 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 KITP10721 976 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 LSP1P33241 339 aa16.79■□□□□ 0.28
CHMP3-207ENST00000485465 VSX2P58304 361 aaPredicted RBP16.79■□□□□ 0.28
CHMP3-207ENST00000485465 CYP4F2P78329 520 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms