RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 WISP2O76076 250 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 VAPBO95292 243 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 SLC16A8O95907 504 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 UQCRHP07919 91 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 ETS1P14921 441 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 OGNP20774 298 aaKnown RBP12.3□□□□□ -0.44
HDAC6-227ENST00000485102 RPL22P35268 128 aaKnown RBP12.3□□□□□ -0.44
HDAC6-227ENST00000485102 AGTR2P50052 363 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 CRADDP78560 199 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 PTK6Q13882 451 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 TESK1Q15569 626 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 C3AR1Q16581 482 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 CCNG2Q16589 344 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 SYT16Q17RD7 645 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 ACSBG2Q5FVE4 666 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 CCDC89Q8N998 374 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 M1APQ8TC57 530 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 ZNF480Q8WV37 535 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 ASB11Q8WXH4 323 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 THAP11Q96EK4 314 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 SCMH1Q96GD3 660 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 PKP4Q99569 1192 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 NAPGQ99747 312 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-227ENST00000485102 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 PCYOX1Q9UHG3 505 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
HDAC6-227ENST00000485102 SCN3AQ9NY46 2000 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 GOLGA6L10A0A0M3HER8 536 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 P2RX6O15547 441 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 TTI1O43156 1089 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 CLDN14O95500 239 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-227ENST00000485102 CHRM3P20309 590 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 IL10P22301 178 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 BCL6P41182 706 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 SKIV2L2P42285 1042 aaKnown RBP12.29□□□□□ -0.44
HDAC6-227ENST00000485102 CLCN7P51798 805 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 TUBA3CQ13748 450 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 EXT1Q16394 746 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 MEP1AQ16819 746 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 KIAA0930Q6ICG6 404 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-227ENST00000485102 TUBA3EQ6PEY2 450 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 SPNS3Q6ZMD2 512 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 PRUNE1Q86TP1 453 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 LGI4Q8N135 537 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 PLPP5Q8NEB5 264 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 PHF10Q8WUB8 498 aaKnown RBP12.29□□□□□ -0.44
HDAC6-227ENST00000485102 C1orf54Q8WWF1 131 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 MTFMTQ96DP5 389 aaKnown RBP12.29□□□□□ -0.44
HDAC6-227ENST00000485102 FAM129AQ9BZQ8 928 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 ENKD1Q9H0I2 346 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 GPAMQ9HCL2 828 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 MMP25Q9NPA2 562 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 TMEM184CQ9NVA4 438 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 GALPQ9UBC7 116 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 PYCARDQ9ULZ3 195 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 SOX13Q9UN79 622 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 MEMO1Q9Y316 297 aa12.29□□□□□ -0.44
HDAC6-227ENST00000485102 A8MUI8 341 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 SMAPO00193 183 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 HAT1O14929 419 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 SEC24DO94855 1032 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 ZSCAN5DPP0CG00 497 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 MPC1LP0DKB6 136 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 ENO3P13929 434 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 CD96P40200 585 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 PAFAH1B1P43034 410 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 RPS15AP62244 130 aaKnown RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 ETF1P62495 437 aaKnown RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 MAT1AQ00266 395 aaKnown RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 PMP22Q01453 160 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 SIX1Q15475 284 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 BTBD16Q32M84 506 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 TTLL9Q3SXZ7 439 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 TMEM214Q6NUQ4 689 aaKnown RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 CYHR1Q6ZMK1 362 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 LANCL3Q6ZV70 420 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 CENPUQ71F23 418 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 VN1R4Q7Z5H5 301 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 ANKRD37Q7Z713 158 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 CILP2Q8IUL8 1156 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 BEST3Q8N1M1 668 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 HORMAD2Q8N7B1 307 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 AMER2Q8N7J2 671 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 OR9A4Q8NGU2 314 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 OR51Q1Q8NH59 317 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 TM4SF19Q96DZ7 209 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 MAGED4Q96JG8 741 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 FRMD6Q96NE9 622 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 RUNDC3BQ96NL0 473 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 TREX2Q9BQ50 279 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 UTP23Q9BRU9 249 aaKnown RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 INTS10Q9NVR2 710 aaKnown RBP12.28□□□□□ -0.44
HDAC6-227ENST00000485102 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
HDAC6-227ENST00000485102 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms