RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 A0A1W2PQ72 361 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 NSA2O95478 260 aaKnown RBP19.09■□□□□ 0.65
ACTB-212ENST00000484841 SLC35G6P0C7Q6 338 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 TNFSF10P50591 281 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 PDAP1Q13442 181 aaKnown RBP19.09■□□□□ 0.65
ACTB-212ENST00000484841 RNASEH2BQ5TBB1 312 aaKnown RBP19.09■□□□□ 0.65
ACTB-212ENST00000484841 CAPN13Q6MZZ7 669 aaPredicted RBP19.09■□□□□ 0.65
ACTB-212ENST00000484841 AGTRAPQ6RW13 159 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 TMEM205Q6UW68 189 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 AGGF1Q8N302 714 aaeCLIP19.09■□□□□ 0.65
ACTB-212ENST00000484841 TBC1D19Q8N5T2 526 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 OR51Q1Q8NH59 317 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 LINGO1Q96FE5 620 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 HAUS8Q9BT25 410 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 PDE10AQ9Y233 779 aa19.09■□□□□ 0.65
ACTB-212ENST00000484841 KCNE1BA0A087WTH5 132 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 A0A1B0GUH1 482 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 DNALI1O14645 258 aaPredicted RBP19.08■□□□□ 0.64
ACTB-212ENST00000484841 LRRTM2O43300 516 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 JRKO75564 520 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 CLDN1O95832 211 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 CYC1P08574 325 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 SOX11P35716 441 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 IL2P60568 153 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 DHX9Q08211 1270 aaKnown RBP19.08■□□□□ 0.64
ACTB-212ENST00000484841 NAE1Q13564 534 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 PCOLCEQ15113 449 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 BBS9Q3SYG4 887 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 PAQR3Q6TCH7 311 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 ASPGQ86U10 573 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 ZCCHC10Q8TBK6 192 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 PSMF1Q92530 271 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 ARL15Q9NXU5 204 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 STMN3Q9NZ72 180 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 ADAMTS6Q9UKP5 1117 aa19.08■□□□□ 0.64
ACTB-212ENST00000484841 MAST4O15021 2626 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 CPAMD8Q8IZJ3 1885 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 SCN3AQ9NY46 2000 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 FEZF1A0PJY2 475 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 CES2O00748 559 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 F10P00742 488 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 ITGAMP11215 1152 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 IL1RNP18510 177 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 COL8A1P27658 744 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 XCR1P46094 333 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 AGTR2P50052 363 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 SKP1P63208 163 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 CSNK1G2P78368 415 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 ZNF33BQ06732 778 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 BTBD16Q32M84 506 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 HIBCHQ6NVY1 386 aaPredicted RBP19.07■□□□□ 0.64
ACTB-212ENST00000484841 LCTLQ6UWM7 567 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 KIAA0408Q6ZU52 694 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 CPEB2Q7Z5Q1 589 aaKnown RBP19.07■□□□□ 0.64
ACTB-212ENST00000484841 SPNS2Q8IVW8 549 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 ARHGEF39Q8N4T4 335 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 GPATCH11Q8N954 259 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 SLC13A3Q8WWT9 602 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 CYTH2Q99418 400 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 VN1R1Q9GZP7 353 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 HCN3Q9P1Z3 774 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 ABI3Q9P2A4 366 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 SNX12Q9UMY4 172 aa19.07■□□□□ 0.64
ACTB-212ENST00000484841 USP9YO00507 2555 aaPredicted RBP19.06■□□□□ 0.64
ACTB-212ENST00000484841 A8MUI8 341 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 SGK494L7N484 410 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 E2F3O00716 465 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 SEC24DO94855 1032 aaPredicted RBP19.06■□□□□ 0.64
ACTB-212ENST00000484841 RASAL1O95294 804 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 CRYABP02511 175 aaKnown RBP19.06■□□□□ 0.64
ACTB-212ENST00000484841 CELA2AP08217 269 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 CDH1P12830 882 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 BCL6P41182 706 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 ACTN3Q08043 901 aaPredicted RBP19.06■□□□□ 0.64
ACTB-212ENST00000484841 TMEM214Q6NUQ4 689 aaKnown RBP19.06■□□□□ 0.64
ACTB-212ENST00000484841 MBOAT1Q6ZNC8 495 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 VN1R4Q7Z5H5 301 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 PDIK1LQ8N165 341 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 ATL1Q8WXF7 558 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 CERS2Q96G23 380 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 MACROD1Q9BQ69 325 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 SLX1AQ9BQ83 275 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 RNF32Q9H0A6 362 aa19.06■□□□□ 0.64
ACTB-212ENST00000484841 DDX47Q9H0S4 455 aaKnown RBP19.06■□□□□ 0.64
ACTB-212ENST00000484841 USP9XQ93008 2570 aaPredicted RBP19.05■□□□□ 0.64
ACTB-212ENST00000484841 OR5H15A6NDH6 313 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 WDPCPO95876 746 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 AHSGP02765 367 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 TCP1P17987 556 aaKnown RBP19.05■□□□□ 0.64
ACTB-212ENST00000484841 CCR8P51685 355 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 CDKN2DP55273 166 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 AP1S2P56377 157 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 RBM20Q5T481 1227 aaKnown RBP19.05■□□□□ 0.64
ACTB-212ENST00000484841 DUPD1Q68J44 220 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 ZNF787Q6DD87 383 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 SLC26A11Q86WA9 606 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 MFSD9Q8NBP5 474 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 KCT2Q8NC54 265 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 CFAP36Q96G28 342 aa19.05■□□□□ 0.64
ACTB-212ENST00000484841 IMMP1LQ96LU5 166 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms