RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 PGAM1P18669 254 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 IL10P22301 178 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 RGS4P49798 205 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 TBPL1P62380 186 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 MPP1Q00013 466 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 MAT1AQ00266 395 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 HSP90AA5PQ58FG0 334 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 RNASEH2BQ5TBB1 312 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 FAAH2Q6GMR7 532 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 LCTLQ6UWM7 567 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 CPEB2Q7Z5Q1 589 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 PLD3Q8IV08 490 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 SIRT6Q8N6T7 355 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 OR9A4Q8NGU2 314 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 NR4A3Q92570 626 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 TAAR6Q96RI8 345 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 SARGQ9BW04 601 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 SGPP1Q9BX95 441 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 VN1R1Q9GZP7 353 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 PARVBQ9HBI1 364 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 IARS2Q9NSE4 1012 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 TTC4O95801 387 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 WDPCPO95876 746 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 F7P08709 466 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 BCL6P41182 706 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 AGTR2P50052 363 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 SNRPNP63162 240 aaKnown RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 PLAG1Q6DJT9 500 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 HIBCHQ6NVY1 386 aaPredicted RBP10.84□□□□□ -0.67
SCFD1-206ENST00000484733 KIAA0408Q6ZU52 694 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 C17orf64Q86WR6 236 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 CNTN4Q8IWV2 1026 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 PLPP5Q8NEB5 264 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 OR51Q1Q8NH59 317 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 EEF1AKMT1Q8WVE0 214 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 TAS2R13Q9NYV9 303 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 ADAMTS6Q9UKP5 1117 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 PCDHGB6Q9Y5F9 930 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 SLC22A7Q9Y694 548 aa10.84□□□□□ -0.67
SCFD1-206ENST00000484733 RP1L1Q8IWN7 2480 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-206ENST00000484733 POLEQ07864 2286 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 OR5H15A6NDH6 313 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CDK2AP1O14519 115 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 PRAMEF2O60811 474 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CRYABP02511 175 aaKnown RBP10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CELA2AP08217 269 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CRYMQ14894 314 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 SPANXN3Q5MJ09 141 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ABHD17BQ5VST6 288 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 AGTRAPQ6RW13 159 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 PALM2Q8IXS6 379 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 MFSD9Q8NBP5 474 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF354BQ96LW1 612 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 NAT9Q9BTE0 207 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ABCF3Q9NUQ8 709 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 TEKT2Q9UIF3 430 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 NBPF19A0A087WUL8 3843 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.83□□□□□ -0.683e-6■□□□□ 9.1
SCFD1-206ENST00000484733 DUPD1Q68J44 220 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ANKRD37Q7Z713 158 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ASPGQ86U10 573 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 MYO1HQ8N1T3 1032 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ABHD11Q8NFV4 315 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 OR4K1Q8NGD4 311 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 SUN3Q8TAQ9 357 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 M1APQ8TC57 530 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 HAUS8Q9BT25 410 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ANKHQ9HCJ1 492 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 STMN3Q9NZ72 180 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CORO1CQ9ULV4 474 aaPredicted RBP10.83□□□□□ -0.68
SCFD1-206ENST00000484733 ENTPD4Q9Y227 616 aa10.83□□□□□ -0.68
SCFD1-206ENST00000484733 CROCCQ5TZA2 2017 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 DNALI1O14645 258 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-206ENST00000484733 LCMT2O60294 686 aaKnown RBP10.82□□□□□ -0.68
SCFD1-206ENST00000484733 RASAL1O95294 804 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 NPPBP16860 134 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 GABRB3P28472 473 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 GRK3P35626 688 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 DHX9Q08211 1270 aaKnown RBP10.82□□□□□ -0.68
SCFD1-206ENST00000484733 NAE1Q13564 534 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 C1QL3Q5VWW1 255 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 PAQR3Q6TCH7 311 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 PRSS41Q7RTY9 318 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 STRA8Q7Z7C7 330 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 AFAP1L2Q8N4X5 818 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 SLCO2A1Q92959 643 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 MAGEB10Q96LZ2 347 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-206ENST00000484733 OR1F2PQ96R84 312 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 OSBPL9Q96SU4 736 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 SH2B3Q9UQQ2 575 aa10.82□□□□□ -0.68
SCFD1-206ENST00000484733 GOLGA6L10A0A0M3HER8 536 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 XCR1P46094 333 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 AP1S2P56377 157 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 EXT1Q16394 746 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 CAPN13Q6MZZ7 669 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-206ENST00000484733 NIPAL1Q6NVV3 410 aa10.81□□□□□ -0.68
SCFD1-206ENST00000484733 SLC26A11Q86WA9 606 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms