RNA–Protein interactions for RNA: ENST00000484528.1

USP40-215, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 933 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-215ENST00000484528 RPS15AP62244 130 aaKnown RBP20.42■□□□□ 0.86
USP40-215ENST00000484528 CSNK1G2P78368 415 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 NAE1Q13564 534 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 FAM53BQ14153 422 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 PHKG1Q16816 387 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 BBS9Q3SYG4 887 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 UGT3A1Q6NUS8 523 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 AGTRAPQ6RW13 159 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 FAM180AQ6UWF9 173 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 MAMDC2Q7Z304 686 aaPredicted RBP20.42■□□□□ 0.86
USP40-215ENST00000484528 IGDCC3Q8IVU1 814 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 MYO1HQ8N1T3 1032 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 LINGO1Q96FE5 620 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 CCDC138Q96M89 665 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 TAS2R13Q9NYV9 303 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 SNX12Q9UMY4 172 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 OSGIN2Q9Y236 505 aa20.42■□□□□ 0.86
USP40-215ENST00000484528 IGHV3-20A0A0C4DH32 117 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 DYTNA2CJ06 578 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 WIPF3A6NGB9 483 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 WFS1O76024 890 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 SEC24DO94855 1032 aaPredicted RBP20.41■□□□□ 0.86
USP40-215ENST00000484528 C8GP07360 202 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 BCL6P41182 706 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 MINDY4Q4G0A6 757 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 HP1BP3Q5SSJ5 553 aaPredicted RBP20.41■□□□□ 0.86
USP40-215ENST00000484528 ZNF787Q6DD87 383 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 LRRC8EQ6NSJ5 796 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 LANCL3Q6ZV70 420 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 C17orf64Q86WR6 236 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 PALM2Q8IXS6 379 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 PWWP2AQ96N64 755 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 VN1R1Q9GZP7 353 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 ZNF700Q9H0M5 742 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 TRMT1Q9NXH9 659 aaKnown RBP20.41■□□□□ 0.86
USP40-215ENST00000484528 MYO7BQ6PIF6 2116 aa20.41■□□□□ 0.86
USP40-215ENST00000484528 CRYBG3Q68DQ2 2970 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 LOC102723996A0A087X1L8 192 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 OR2W5A6NFC9 320 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 SGK494L7N484 410 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 BMP10O95393 424 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 NSA2O95478 260 aaKnown RBP20.4■□□□□ 0.86
USP40-215ENST00000484528 C8orf89P0DMQ9 161 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 CDH1P12830 882 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 FDXRP22570 491 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 SPANXN3Q5MJ09 141 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 TMEM205Q6UW68 189 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 KCT2Q8NC54 265 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 CERS2Q96G23 380 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 CFAP36Q96G28 342 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 PCBD2Q9H0N5 130 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 PARVBQ9HBI1 364 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 PPANQ9NQ55 473 aaKnown RBP20.4■□□□□ 0.86
USP40-215ENST00000484528 OLAHQ9NV23 265 aa20.4■□□□□ 0.86
USP40-215ENST00000484528 LCMT2O60294 686 aaKnown RBP20.39■□□□□ 0.85
USP40-215ENST00000484528 TTC4O95801 387 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 AHSGP02765 367 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 EDN3P14138 238 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 HRH2P25021 359 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 XCR1P46094 333 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 TNFSF10P50591 281 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 SRSF11Q05519 484 aaKnown RBP20.39■□□□□ 0.85
USP40-215ENST00000484528 SP140Q13342 867 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 TMEM214Q6NUQ4 689 aaKnown RBP20.39■□□□□ 0.85
USP40-215ENST00000484528 SLC26A11Q86WA9 606 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 GPATCH11Q8N954 259 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 OR51Q1Q8NH59 317 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 METTL21AQ8WXB1 218 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 PYCR2Q96C36 320 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 RBCK1Q9BYM8 510 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.39■□□□□ 0.85
USP40-215ENST00000484528 PLAC1Q9HBJ0 212 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 CHMP2BQ9UQN3 213 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 MYO9AB2RTY4 2548 aa20.39■□□□□ 0.85
USP40-215ENST00000484528 KCNE1BA0A087WTH5 132 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 ZNF860A6NHJ4 632 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 H0YIG0 161 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 LRRTM2O43300 516 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 ZSCAN12O43309 604 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 RDH16O75452 317 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 WDPCPO95876 746 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 MEF2AQ02078 507 aaPredicted RBP20.38■□□□□ 0.85
USP40-215ENST00000484528 PDAP1Q13442 181 aaKnown RBP20.38■□□□□ 0.85
USP40-215ENST00000484528 ZXDCQ2QGD7 858 aaPredicted RBP20.38■□□□□ 0.85
USP40-215ENST00000484528 HIBCHQ6NVY1 386 aaPredicted RBP20.38■□□□□ 0.85
USP40-215ENST00000484528 RIPOR1Q6ZS17 1223 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 ASPGQ86U10 573 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 CNTN4Q8IWV2 1026 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 BCORP1Q8N888 145 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 CAMKVQ8NCB2 501 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 GABPB2Q8TAK5 448 aaPredicted RBP20.38■□□□□ 0.85
USP40-215ENST00000484528 CAPZA3Q96KX2 299 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 IMMP1LQ96LU5 166 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 TAAR6Q96RI8 345 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 SLX1AQ9BQ83 275 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 TUBB6Q9BUF5 446 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 SGPP1Q9BX95 441 aa20.38■□□□□ 0.85
USP40-215ENST00000484528 TRAV17A0A0B4J275 112 aa20.37■□□□□ 0.85
USP40-215ENST00000484528 CES2O00748 559 aa20.37■□□□□ 0.85
USP40-215ENST00000484528 PCDH17O14917 1159 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms