RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 UBTD2Q8WUN7 234 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 ATL1Q8WXF7 558 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 UTP4Q969X6 686 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 RHBDF1Q96CC6 855 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SCARF2Q96GP6 870 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 CCM2Q9BSQ5 444 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SLC25A23Q9BV35 468 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 SLC12A9Q9BXP2 914 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 LRRN3Q9H3W5 708 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF385DQ9H6B1 395 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 NOL11Q9H8H0 719 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 AKTIPQ9H8T0 292 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 IPPKQ9H8X2 491 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PRDM9Q9NQV7 894 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 TRNAU1APQ9NX07 287 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 KLHL3Q9UH77 587 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PRPF19Q9UMS4 504 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 PSMD13Q9UNM6 376 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 WDR37Q9Y2I8 494 aa6.7□□□□□ -1.34
BRCA1-216ENST00000484087 CFAP20Q9Y6A4 193 aaKnown RBP6.7□□□□□ -1.34
BRCA1-216ENST00000484087 ATP6AP2A0A1C7CYW4 349 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 A6NCN8 305 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 BBIP1A8MTZ0 92 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SLC28A1O00337 649 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 NTN3O00634 580 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 LIN7AO14910 233 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 VEGFDO43915 354 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ATP6AP2O75787 350 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SLCO2B1O94956 709 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 WDR47O94967 919 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 OR4F21O95013 312 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 KRT6AP02538 564 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 KRT6BP04259 564 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 CAPN1P07384 714 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SNRPB2P08579 225 aaKnown RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 LINC00032P0C843 101 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 EBLN1P0CF75 366 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 IDO1P14902 403 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 GLB1P16278 677 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 EIF2S3P41091 472 aaKnown RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 KRT6CP48668 564 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 PPP1CAP62136 330 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SLC25A3Q00325 362 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 MAD2L1Q13257 205 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 NFE2L1Q14494 772 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 GBX1Q14549 363 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 C16orf72Q14CZ0 275 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 IMPG1Q17R60 797 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 COL28A1Q2UY09 1125 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 UGT3A2Q3SY77 523 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ATP6AP1LQ52LC2 224 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 AGKQ53H12 422 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 FBXO48Q5FWF7 155 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SNAP47Q5SQN1 464 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 C1orf146Q5VVC0 180 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 TMEM220Q6QAJ8 160 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 XKR5Q6UX68 686 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 DNAJC14Q6Y2X3 702 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ZNF574Q6ZN55 896 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 DEFB107AQ8IZN7 70 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 CDYL2Q8N8U2 506 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 PCYOX1LQ8NBM8 494 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 CFAP61Q8NHU2 1237 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ASB11Q8WXH4 323 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 NAT6Q93015 286 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ESAMQ96AP7 390 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 NXPE2Q96DL1 559 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 MARK4Q96L34 752 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 DEPDC7Q96QD5 511 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 GFM1Q96RP9 751 aaKnown RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 OCSTAMPQ9BR26 566 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SLC29A3Q9BZD2 475 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 DENND2DQ9H6A0 471 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 DCLRE1BQ9H816 532 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 TRIM39Q9HCM9 518 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 TNFRSF12AQ9NP84 129 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 TRPS1Q9UHF7 1281 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 POLG2Q9UHN1 485 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ADAMTS6Q9UKP5 1117 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 BTRCQ9Y297 605 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 TIMM22Q9Y584 194 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 SDK2Q58EX2 2172 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 ANKRD12Q6UB98 2062 aa6.69□□□□□ -1.34
BRCA1-216ENST00000484087 URB1O60287 2271 aaKnown RBP6.69□□□□□ -1.34
BRCA1-216ENST00000484087 RHPN2P1A8MT19 583 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 A8MU76 341 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PDZK1P1A8MUH7 402 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 A8MUI8 341 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 GFYI3L273 518 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PPP6CO00743 305 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ANGPT2O15123 496 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 RGS14O43566 566 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 SGTAO43765 313 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ULK1O75385 1050 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 CLDN9O95484 217 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 STAMBPO95630 424 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 CCL4P13236 92 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 PCSK2P16519 638 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 ITGAXP20702 1163 aa6.68□□□□□ -1.34
BRCA1-216ENST00000484087 GGT5P36269 586 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms