RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 ZSCAN5DPP0CG00 497 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 MYBL2P10244 700 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 ABOP16442 354 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 RPA3P35244 121 aaPredicted RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 BCL6P41182 706 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 TTPAP49638 278 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PNLIPRP1P54315 467 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 RHAGQ02094 409 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 KLHL38Q2WGJ6 581 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 MINDY4Q4G0A6 757 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 ANKRD20A4Q4UJ75 823 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 CES3Q6UWW8 571 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PPP1R21Q6ZMI0 780 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 MMP21Q8N119 569 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 CA5BP1Q8WTZ4 195 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 METTL21AQ8WXB1 218 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 LPGAT1Q92604 370 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PEX13Q92968 403 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 TM4SF19Q96DZ7 209 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PRAP1Q96NZ9 151 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PANX3Q96QZ0 392 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 MMP25Q9NPA2 562 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 ANAPC5Q9UJX4 755 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 PPT2Q9UMR5 302 aa12.12□□□□□ -0.47
UBR4-213ENST00000483922 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
UBR4-213ENST00000483922 H0YIG0 161 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 KPNA5O15131 536 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 LCMT2O60294 686 aaKnown RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 VPS26AO75436 327 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 TPM1P09493 284 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 CD46P15529 392 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 CD1EP15812 388 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 IL1RNP18510 177 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 DNAJA1P31689 397 aaKnown RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 XCR1P46094 333 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 IST1P53990 364 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 AP2B1P63010 937 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 TSTA3Q13630 321 aaPredicted RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 MAPKAPK3Q16644 382 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 SFT2D3Q587I9 215 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 EMC4Q5J8M3 183 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 PCID2Q5JVF3 399 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 TMEM214Q6NUQ4 689 aaKnown RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 PAPD4Q6PIY7 484 aaKnown RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 CYHR1Q6ZMK1 362 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 CEP128Q6ZU80 1094 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 GHDCQ8N2G8 530 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 RAB42Q8N4Z0 105 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 KCT2Q8NC54 265 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 ELP5Q8TE02 316 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 TSLPQ969D9 159 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 GSX1Q9H4S2 264 aaPredicted RBP12.11□□□□□ -0.47
UBR4-213ENST00000483922 ABCF3Q9NUQ8 709 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 LRFN1Q9P244 771 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 SH2B3Q9UQQ2 575 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 CRYL1Q9Y2S2 319 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 MED16Q9Y2X0 877 aa12.11□□□□□ -0.47
UBR4-213ENST00000483922 SCN3AQ9NY46 2000 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 KCNE1BA0A087WTH5 132 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 A0A1B0GTH9 108 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 LIASO43766 372 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 NME2P1O60361 137 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 NDUFS3O75489 264 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 ZNF189O75820 626 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 NADKO95544 446 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 CD99P14209 185 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 PKMP14618 531 aaKnown RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 NME2P22392 152 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 ATP5DP30049 168 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 PPARGP37231 505 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 RFC3P40938 356 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 AVPR1BP47901 424 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 SESN2P58004 480 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 OC90Q02509 493 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 PTK6Q13882 451 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 USP10Q14694 798 aaKnown RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 ARHGAP19Q14CB8 494 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 AARS2Q5JTZ9 985 aaKnown RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 MFSD4BQ5TF39 518 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 RAD9BQ6WBX8 426 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 PCGF5Q86SE9 256 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 LRRC6Q86X45 466 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 REXO1L1PQ8IX06 675 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 CCDC170Q8IYT3 715 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 TMEM178AQ8NBL3 297 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 PLPP5Q8NEB5 264 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 OR5T3Q8NGG3 340 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 LILRB4Q8NHJ6 448 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 GIMAP7Q8NHV1 300 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 GSDMBQ8TAX9 411 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 MAGEC3Q8TD91 643 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 RERGQ96A58 199 aaPredicted RBP12.1□□□□□ -0.47
UBR4-213ENST00000483922 MFSD3Q96ES6 412 aa12.1□□□□□ -0.47
UBR4-213ENST00000483922 FOPNLQ96NB1 174 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms