RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 HUS1BQ8NHY5 278 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 RSC1A1Q92681 617 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 PRAP1Q96NZ9 151 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 QRFPRQ96P65 431 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 CDC6Q99741 560 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 ZFYVE21Q9BQ24 234 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 EBF4Q9BQW3 602 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 NLNQ9BYT8 704 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 AKTIPQ9H8T0 292 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 SLC6A20Q9NP91 592 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 TMEM9BQ9NQ34 198 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 SEMA4GQ9NTN9 838 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
USP39-215ENST00000481409 NCDNQ9UBB6 729 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 HEY2Q9UBP5 337 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 EIF3LQ9Y262 564 aaKnown RBP9.75□□□□□ -0.85
USP39-215ENST00000481409 RALGAPA1Q6GYQ0 2036 aa9.75□□□□□ -0.85
USP39-215ENST00000481409 ADAMTS9Q9P2N4 1935 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 DYTNA2CJ06 578 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 FFAR3O14843 346 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 CAPN5O15484 640 aaPredicted RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 GPR42O15529 346 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ZSCAN9O15535 394 aaPredicted RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 OR1F1O43749 312 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 HNRNPCL1O60812 293 aaKnown RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 MYO1DO94832 1006 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ANKRD34CP0C6C1 535 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 PRPS2P11908 318 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 PCNAP12004 261 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 CDH3P22223 829 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ACP1P24666 158 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 SERPINB3P29508 390 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ALDH4A1P30038 563 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ACADVLP49748 655 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 STX1BP61266 288 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 STXBP1P61764 594 aaKnown RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 DAB2P98082 770 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 SQLEQ14534 574 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 RBBP5Q15291 538 aaKnown RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 AP5B1Q2VPB7 878 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 C6orf136Q5SQH8 315 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 DEPDC1Q5TB30 811 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 CACHD1Q5VU97 1274 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 NXNQ6DKJ4 435 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 TMEM71Q6P5X7 295 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 GALNT18Q6P9A2 607 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 RNF44Q7L0R7 432 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 TRPM8Q7Z2W7 1104 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 PAGE2Q7Z2X7 111 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 PRSS42Q7Z5A4 293 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ZFAND4Q86XD8 727 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 EID2Q8N6I1 236 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 C19orf47Q8N9M1 422 aaKnown RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 CAMKVQ8NCB2 501 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 NT5CQ8TCD5 201 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 TSPEARQ8WU66 669 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 STARD8Q92502 1023 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 RERGQ96A58 199 aaPredicted RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 CCDC74AQ96AQ1 378 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 THOC1Q96FV9 657 aaKnown RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 C3orf30Q96M34 536 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 TRAPPC9Q96Q05 1148 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ACPTQ9BZG2 426 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ROGDIQ9GZN7 287 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 MYLK2Q9H1R3 596 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 WDR55Q9H6Y2 383 aaPredicted RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 LRTM1Q9HBL6 345 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 DMRT3Q9NQL9 472 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 SAR1AQ9NR31 198 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 CUEDC1Q9NWM3 386 aaPredicted RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 PDP2Q9P2J9 529 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 ADAM29Q9UKF5 820 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 PILRAQ9UKJ1 303 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 SH2B3Q9UQQ2 575 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 RUVBL1Q9Y265 456 aaKnown RBP9.74□□□□□ -0.85
USP39-215ENST00000481409 BTRCQ9Y297 605 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 PCDHGA4Q9Y5G9 962 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 KNL1Q8NG31 2342 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 HEATR5BQ9P2D3 2071 aa9.74□□□□□ -0.85
USP39-215ENST00000481409 CABIN1Q9Y6J0 2220 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 A0A088AWK7 358 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 CCT8L1PA6NM43 557 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 MAGEB17A8MXT2 336 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 CDX4O14627 284 aaPredicted RBP9.73□□□□□ -0.85
USP39-215ENST00000481409 HAT1O14929 419 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 B4GAT1O43505 415 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 PRMT3O60678 531 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 SEC22BO75396 215 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 ATP5HO75947 161 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 SLC34A2O95436 690 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 ZBTB11O95625 1053 aaPredicted RBP9.73□□□□□ -0.85
USP39-215ENST00000481409 CPNE6O95741 557 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 LDOC1O95751 146 aaPredicted RBP9.73□□□□□ -0.85
USP39-215ENST00000481409 JUNP05412 331 aaKnown RBP9.73□□□□□ -0.85
USP39-215ENST00000481409 SLC35G6P0C7Q6 338 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 TYRP1P17643 537 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 DDX5P17844 614 aaKnown RBP9.73□□□□□ -0.85
USP39-215ENST00000481409 MAGP20916 626 aa9.73□□□□□ -0.85
USP39-215ENST00000481409 ZNF10P21506 573 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 214.6 ms