RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TMEM205Q6UW68 189 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 LAPTM4BQ86VI4 370 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 SIRT6Q8N6T7 355 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 GPATCH11Q8N954 259 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 C2CD4AQ8NCU7 369 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 SUCOQ9UBS9 1254 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 MED16Q9Y2X0 877 aa13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 PRRC2CQ9Y520 2896 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-209ENST00000478349 E2F3O00716 465 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 P2RX6O15547 441 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 LRRTM2O43300 516 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 JRKO75564 520 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 HAUS5O94927 633 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 RASAL1O95294 804 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 RNF224P0DH78 156 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 XCR1P46094 333 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 IL2P60568 153 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 MPP1Q00013 466 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 PDAP1Q13442 181 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 HERC3Q15034 1050 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 EXT1Q16394 746 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 RNASEH2BQ5TBB1 312 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 HIBCHQ6NVY1 386 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 AGTRAPQ6RW13 159 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 LCTLQ6UWM7 567 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 CYHR1Q6ZMK1 362 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 GALNT7Q86SF2 657 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 ASPGQ86U10 573 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 PLD3Q8IV08 490 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 LRRC56Q8IYG6 542 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 ARHGEF39Q8N4T4 335 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 OR9A4Q8NGU2 314 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 DNAJB8Q8NHS0 232 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 NR4A3Q92570 626 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 SIGLEC10Q96LC7 697 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 RUNDC3BQ96NL0 473 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 OSBPL9Q96SU4 736 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
SMARCE1-209ENST00000478349 SPENQ96T58 3664 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 OR5H15A6NDH6 313 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 FFAR3O14843 346 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 GPR42O15529 346 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 CLDN1O95832 211 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 STSP08842 583 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 ENO2P09104 434 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 JAK1P23458 1154 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 CCR8P51685 355 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 CASP6P55212 293 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 TAS2R50P59544 299 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 ZNF33BQ06732 778 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 ILF2Q12905 390 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 NAA30Q147X3 362 aaPredicted RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 PCOLCEQ15113 449 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 BTBD16Q32M84 506 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 PLAG1Q6DJT9 500 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 TMEM214Q6NUQ4 689 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 CPEB2Q7Z5Q1 589 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 CNTN4Q8IWV2 1026 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 PDIK1LQ8N165 341 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 CATSPER1Q8NEC5 780 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 OR51Q1Q8NH59 317 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 SLC13A3Q8WWT9 602 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 LINGO1Q96FE5 620 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 ZNF354BQ96LW1 612 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 OR1F2PQ96R84 312 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 NDNQ99608 321 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 VN1R1Q9GZP7 353 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 PPANQ9NQ55 473 aaKnown RBP13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 ARL15Q9NXU5 204 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 PDE10AQ9Y233 779 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 SLC22A7Q9Y694 548 aa13.67□□□□□ -0.22
SMARCE1-209ENST00000478349 ICE1Q9Y2F5 2266 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 NUP210LQ5VU65 1888 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 URADA6NGE7 173 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 DNALI1O14645 258 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 NDC80O14777 642 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 PRAMEF2O60811 474 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 TCP1P17987 556 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 IL1RNP18510 177 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 DCTP40126 519 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 BCL6P41182 706 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 CSNK1G2P78368 415 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 MAT1AQ00266 395 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 RGS1Q08116 209 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 DHX9Q08211 1270 aaKnown RBP13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 NAE1Q13564 534 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 SYT16Q17RD7 645 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 DUPD1Q68J44 220 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 HIST2H2BCQ6DN03 193 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 GFRALQ6UXV0 394 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 SYDE1Q6ZW31 735 aaPredicted RBP13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 VN1R4Q7Z5H5 301 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 SLC5A8Q8N695 610 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 HORMAD2Q8N7B1 307 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 ZCCHC10Q8TBK6 192 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 EEF1AKMT1Q8WVE0 214 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 PSMF1Q92530 271 aa13.66□□□□□ -0.22
SMARCE1-209ENST00000478349 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms