RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 NXNL1Q96CM4 212 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 TM4SF19Q96DZ7 209 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 PAFAH2Q99487 392 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 SPSB2Q99619 263 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 TMEM79Q9BSE2 394 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 SLC26A1Q9H2B4 701 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 SOX17Q9H6I2 414 aaPredicted RBP14.83□□□□□ -0.04
HMGA1-206ENST00000478214 WDR54Q9H977 334 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 NMRAL1Q9HBL8 299 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 WWOXQ9NZC7 414 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 CD274Q9NZQ7 290 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 TUBD1Q9UJT1 453 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 TLK1Q9UKI8 766 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 RNF112Q9ULX5 631 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 CDC14AQ9UNH5 594 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 KCNE2Q9Y6J6 123 aa14.83□□□□□ -0.04
HMGA1-206ENST00000478214 A0A087WUV0 522 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 A0A0A6YYC8 382 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 POC1B-GALNT4F8VUJ3 575 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 I3L1I5 382 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 FFAR3O14843 346 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 GPR42O15529 346 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 OR1F1O43749 312 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 RFPL1O75677 317 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 ALDOAP04075 364 aaKnown RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 TYK2P29597 1187 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 SLC26A3P40879 764 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 HSPA7P48741 367 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 SERPINB8P50452 374 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 C19orf57Q0VDD7 668 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 NFATC3Q12968 1075 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 DSG2Q14126 1118 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 NDUFA9Q16795 377 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 CDKL4Q5MAI5 379 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 TEX35Q5T0J7 233 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 SULT1C3Q6IMI6 304 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 NXPE4Q6UWF7 544 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 PPP1R32Q7Z5V6 425 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 MRGPREQ86SM8 312 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 ASPGQ86U10 573 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 GSPT2Q8IYD1 628 aaKnown RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 TCAIMQ8N3R3 496 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 CAMKVQ8NCB2 501 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 C9orf43Q8TAL5 461 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 STAG3L4Q8TBR4 150 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 SLC13A3Q8WWT9 602 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 ESAMQ96AP7 390 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 MVB12AQ96EY5 273 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 MMABQ96EY8 250 aaPredicted RBP14.82□□□□□ -0.04
HMGA1-206ENST00000478214 ABHD17AQ96GS6 310 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 SARGQ9BW04 601 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 DRC3Q9H069 523 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 ING2Q9H160 280 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 SLC25A18Q9H1K4 315 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 PELI2Q9HAT8 420 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 COL6A6A6NMZ7 2263 aa14.82□□□□□ -0.04
HMGA1-206ENST00000478214 MDC1Q14676 2089 aaKnown RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 A0A087X1B8 175 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 A0A096LPK6 155 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 TRBC2A0A5B9 178 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 VSTM2BA6NLU5 285 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 VARSP26640 1264 aaKnown RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 GGT5P36269 586 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 MSH2P43246 934 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 SCTRP47872 440 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 CCL11P51671 97 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 REEP5Q00765 189 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 CDC16Q13042 620 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 FAM53BQ14153 422 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 VWA2Q5GFL6 755 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 TMEM214Q6NUQ4 689 aaKnown RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 TRMT10CQ7L0Y3 403 aaKnown RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 PRSS41Q7RTY9 318 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 CCDC91Q7Z6B0 441 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 PRSS58Q8IYP2 241 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 AMER3Q8N944 861 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 KCT2Q8NC54 265 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 PDPRQ8NCN5 879 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 OR9A4Q8NGU2 314 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 ZCCHC10Q8TBK6 192 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 STT3BQ8TCJ2 826 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 DCAKDQ8WVC6 231 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 MOCOSQ96EN8 888 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 ATOH8Q96SQ7 321 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 ZNF71Q9NQZ8 489 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 DNAJC11Q9NVH1 559 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 TRPC4Q9UBN4 977 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 ZNF282Q9UDV7 671 aaPredicted RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 PTBP2Q9UKA9 531 aaKnown RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 NXT1Q9UKK6 140 aaKnown RBP14.81□□□□□ -0.04
HMGA1-206ENST00000478214 IKBKGQ9Y6K9 419 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 ZNF462Q96JM2 2506 aa14.81□□□□□ -0.04
HMGA1-206ENST00000478214 IGLV3-12A0A075B6K2 115 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 SUPT3HB4E1H0 165 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 MKRN2OSH3BPM6 223 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 UBXN8O00124 270 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 PRPF4O43172 522 aaKnown RBP eCLIP14.8□□□□□ -0.04
HMGA1-206ENST00000478214 NDUFS4O43181 175 aa14.8□□□□□ -0.04
HMGA1-206ENST00000478214 RIPK2O43353 540 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms