RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 MGRN1O60291 552 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 PRPS2P11908 318 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 BCL6P41182 706 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 AFF3P51826 1226 aaKnown RBP13.86□□□□□ -0.19
COL4A6-206ENST00000477085 MAZP56270 477 aaKnown RBP13.86□□□□□ -0.19
COL4A6-206ENST00000477085 CLDN8P56748 225 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 KCNK10P57789 538 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 CYP4F2P78329 520 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 WDR45BQ5MNZ6 344 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 C10orf62Q5T681 223 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-206ENST00000477085 ZNF425Q6IV72 752 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 SLC2A7Q6PXP3 512 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 ZNF548Q8NEK5 533 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-206ENST00000477085 UBE2E3Q969T4 207 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 PPM1MQ96MI6 270 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 CDRT15Q96T59 188 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 GPATCH1Q9BRR8 931 aaKnown RBP13.86□□□□□ -0.19
COL4A6-206ENST00000477085 DPH7Q9BTV6 452 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 DPY30Q9C005 99 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 AICDAQ9GZX7 198 aa13.86□□□□□ -0.19
COL4A6-206ENST00000477085 BBIP1A8MTZ0 92 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 HAT1O14929 419 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 KDM1AO60341 852 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 SDC3O75056 442 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 EEDO75530 441 aaKnown RBP13.85□□□□□ -0.19
COL4A6-206ENST00000477085 GBAP04062 536 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 POLR2CP19387 275 aaPredicted RBP13.85□□□□□ -0.19
COL4A6-206ENST00000477085 GRIA3P42263 894 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 PSME3P61289 254 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 ABATP80404 500 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 PLCL1Q15111 1095 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 ELOCQ15369 112 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 SPANXN4Q5MJ08 99 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 C16orf89Q6UX73 402 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 HACD2Q6Y1H2 254 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 TRIM73Q86UV7 250 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 HPS6Q86YV9 775 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 PARP9Q8IXQ6 854 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 CREB3L4Q8TEY5 395 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 METTL2AQ96IZ6 378 aaKnown RBP13.85□□□□□ -0.19
COL4A6-206ENST00000477085 SORBS1Q9BX66 1292 aaKnown RBP13.85□□□□□ -0.19
COL4A6-206ENST00000477085 IL1RL2Q9HB29 575 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 TMEM184CQ9NVA4 438 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 SIRT5Q9NXA8 310 aa13.85□□□□□ -0.19
COL4A6-206ENST00000477085 ANGPT2O15123 496 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 PPM1DO15297 605 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 NOBOXO60393 691 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 LRATO95237 230 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 B3GALT4O96024 378 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 UGT2B7P16662 529 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 CXCR2P25025 360 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 PTX3P26022 381 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 LSSP48449 732 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 MTTPP55157 894 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 HHEXQ03014 270 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ACSM2AQ08AH3 577 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 CEACAM7Q14002 265 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 FAM174BQ3ZCQ3 159 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 PIGGQ5H8A4 983 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 COQ5Q5HYK3 327 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ACSM2BQ68CK6 577 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 PMS2CLQ68D20 193 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 GALNT18Q6P9A2 607 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 TMEM26Q6ZUK4 368 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 COMMD6Q7Z4G1 85 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ZNF438Q7Z4V0 828 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ADCK2Q7Z695 626 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 METTL4Q8N3J2 472 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 FBXW8Q8N3Y1 598 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ARL14Q8N4G2 192 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 OR10G6Q8NH81 332 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 GAB3Q8WWW8 586 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 F2RL3Q96RI0 385 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 MACROD1Q9BQ69 325 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 MS4A8Q9BY19 250 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ZNF717Q9BY31 904 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 PITHD1Q9GZP4 211 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 RASSF4Q9H2L5 321 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 ACTR10Q9NZ32 417 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 EXO1Q9UQ84 846 aaKnown RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 RUVBL1Q9Y265 456 aaKnown RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 SNX11Q9Y5W9 270 aa13.84□□□□□ -0.19
COL4A6-206ENST00000477085 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
COL4A6-206ENST00000477085 TRBC2A0A5B9 178 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 ANKDD1BA6NHY2 528 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 AQP9O43315 295 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 PRAMEF10O60809 474 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 ENTPD5O75356 428 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 PIAS2O75928 621 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 STATHP02808 62 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 CMPK1P30085 196 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 DHPSP49366 369 aaPredicted RBP13.83□□□□□ -0.19
COL4A6-206ENST00000477085 PPP1CAP62136 330 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 HYAL2Q12891 473 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 CAPRIN1Q14444 709 aaKnown RBP13.83□□□□□ -0.19
COL4A6-206ENST00000477085 KIR2DS3Q14952 304 aa13.83□□□□□ -0.19
COL4A6-206ENST00000477085 KPNB1Q14974 876 aaKnown RBP13.83□□□□□ -0.19
COL4A6-206ENST00000477085 SHBQ15464 509 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms