RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 PAQR7Q86WK9 346 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 OR51Q1Q8NH59 317 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 ELP5Q8TE02 316 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 HAUS1Q96CS2 278 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 CDKN2AIPNLQ96HQ2 116 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 OR2A5Q96R48 311 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 SH3GL2Q99962 352 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 CNPPD1Q9BV87 410 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 RTN4Q9NQC3 1192 aaKnown RBP14.35□□□□□ -0.11
SMG5-204ENST00000476954 DEPPQ9NTK1 212 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 NFS1Q9Y697 457 aa14.35□□□□□ -0.11
SMG5-204ENST00000476954 KIAA1549Q9HCM3 1950 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 IGKV1-8A0A0C4DH67 115 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 IQCF5A8MTL0 148 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 H7C0S8 307 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 GPC4O75487 556 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 RPN2P04844 631 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 OR56A5P0C7T3 313 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 TRHRP34981 398 aaPredicted RBP14.34□□□□□ -0.11
SMG5-204ENST00000476954 AGTR2P50052 363 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 ITIH4Q14624 930 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 KAZNQ674X7 775 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 PACS1Q6VY07 963 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 PLD3Q8IV08 490 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 LINC01560Q8TB33 94 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 SMC6Q96SB8 1091 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 LPAR4Q99677 370 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 NUP62CLQ9H1M0 184 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 GBA3Q9H227 469 aa14.34□□□□□ -0.11
SMG5-204ENST00000476954 NLE1Q9NVX2 485 aaPredicted RBP14.34□□□□□ -0.11
SMG5-204ENST00000476954 FIGNL2A6NMB9 653 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 QSOX1O00391 747 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 CST8O60676 142 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 CDC123O75794 336 aaPredicted RBP14.33□□□□□ -0.12
SMG5-204ENST00000476954 ANXA9O76027 345 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 TPH1P17752 444 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 PSMB4P28070 264 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 AVPR1BP47901 424 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 PPIAP62937 165 aaKnown RBP14.33□□□□□ -0.12
SMG5-204ENST00000476954 NFKBIBQ15653 356 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 TYSND1Q2T9J0 566 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 VSIG1Q86XK7 387 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 ZNF592Q92610 1267 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 QKIQ96PU8 341 aaKnown RBP eCLIP14.33□□□□□ -0.12
SMG5-204ENST00000476954 VAT1Q99536 393 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 BDH2Q9BUT1 245 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 SARGQ9BW04 601 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 PACSIN1Q9BY11 444 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 TRMT1Q9NXH9 659 aaKnown RBP14.33□□□□□ -0.12
SMG5-204ENST00000476954 VPS9D1Q9Y2B5 631 aa14.33□□□□□ -0.12
SMG5-204ENST00000476954 A0A0G2JMM0 328 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 A0A1W2PPB8 328 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 A0A1W2PRS3 328 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 CLCA1A8K7I4 914 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 KIR3DP1A8MWS1 328 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 SGK494L7N484 410 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 VPS26AO75436 327 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 EPXP11678 715 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 TNNT1P13805 278 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 IL1RNP18510 177 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 CMPK1P30085 196 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 NR2C2P49116 596 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 RHAGQ02094 409 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 PTK6Q13882 451 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 FAM53BQ14153 422 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 ABRAXAS2Q15018 415 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 NSDHLQ15738 373 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 FILIP1LQ4L180 1135 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 C1orf185Q5T7R7 199 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 ALKBH5Q6P6C2 394 aaKnown RBP14.32□□□□□ -0.12
SMG5-204ENST00000476954 SUSD1Q6UWL2 747 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 YTHDF3Q7Z739 585 aaKnown RBP14.32□□□□□ -0.12
SMG5-204ENST00000476954 KRT222Q8N1A0 295 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 HMGCLL1Q8TB92 370 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 RNASE6Q93091 150 aaKnown RBP14.32□□□□□ -0.12
SMG5-204ENST00000476954 KIAA1191Q96A73 305 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 RAD51AP1Q96B01 352 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 CCDC138Q96M89 665 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 C19orf43Q9BQ61 176 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 MACROD1Q9BQ69 325 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 RAB11FIP5Q9BXF6 653 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 ALKBH4Q9NXW9 302 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 PCYOX1Q9UHG3 505 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 TRHDEQ9UKU6 1024 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 R3HDM2Q9Y2K5 976 aaKnown RBP14.32□□□□□ -0.12
SMG5-204ENST00000476954 CUBNO60494 3623 aa14.32□□□□□ -0.12
SMG5-204ENST00000476954 C1orf105O95561 183 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 CYC1P08574 325 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 RBL1P28749 1068 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 FOXN2P32314 431 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 PEX19P40855 299 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 CDKN2BP42772 138 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 OR4D2P58180 307 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 MYL5Q02045 173 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 KRTAP1-1Q07627 177 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 PAOXQ6QHF9 649 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 CCDC50Q8IVM0 306 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 CYP4Z2PQ8N1L4 340 aa14.31□□□□□ -0.12
SMG5-204ENST00000476954 NAXEQ8NCW5 288 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms