RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ASB9Q96DX5 294 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 YIPF6Q96EC8 236 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MYO19Q96H55 970 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SCLYQ96I15 445 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MEGF10Q96KG7 1140 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TEFMQ96QE5 360 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 OR2A14Q96R47 310 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ZNF300Q96RE9 604 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 LGMNQ99538 433 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 KCNJ15Q99712 375 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ALOXE3Q9BYJ1 711 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CCDC90BQ9GZT6 254 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NXF2Q9GZY0 626 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 CARS2Q9HA77 564 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 SLC52A2Q9HAB3 445 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SAYSD1Q9NPB0 183 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 C14orf119Q9NWQ9 140 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SMPD3Q9NY59 655 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 ING4Q9UNL4 249 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CORO2BQ9UQ03 480 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SHOC2Q9UQ13 582 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 POLR3HQ9Y535 204 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 MAB21L2Q9Y586 359 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 NUBP2Q9Y5Y2 271 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 BACE2Q9Y5Z0 518 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FER1L4A9Z1Z3 1794 aa4.03□□□□□ -1.77
CD55-208ENST00000476590 A0A0U1RQV5 110 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 RNF103-CHMP3A0A140T963 221 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 TCRBV3S1A0A5B6 114 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 HMX2A2RU54 273 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 METTL21EPA6NDL7 271 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 FAM74A7A6NL05 159 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 UBE2CO00762 179 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 COPEO14579 308 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ITGB1BP1O14713 200 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 EFSO43281 561 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 NRP2O60462 931 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 HPGDSO60760 199 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 EFCAB14O75071 495 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 GADD45GO95257 159 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 MOCS2O96007 188 aaPredicted RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 CRHP06850 196 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 LINC00614P0C842 121 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 RNH1P13489 461 aaKnown RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 HOXB4P17483 251 aaPredicted RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 CRHBPP24387 322 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ATP5F1P24539 256 aaPredicted RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 PAX6P26367 422 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 CCR1P32246 355 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ALDH3A2P51648 485 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 BCAT1P54687 386 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 GALCP54803 685 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 FCGRTP55899 365 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 SKP1P63208 163 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ADARB1P78563 741 aaKnown RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 KLF10Q13118 480 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ATP6AP1Q15904 470 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 CDNFQ49AH0 187 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 FAM74A3Q4VXF1 159 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 TMEM35AQ53FP2 167 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ZNF805Q5CZA5 627 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 XKR4Q5GH76 650 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 RIPPLY2Q5TAB7 128 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ANKRD22Q5VYY1 191 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 IZUMO3Q5VZ72 239 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 AFMIDQ63HM1 303 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 JADE1Q6IE81 842 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 CENPPQ6IPU0 288 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 DPY19L2P1Q6NXN4 242 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 TAF2Q6P1X5 1199 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 WDR73Q6P4I2 378 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 SLC22A25Q6T423 547 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 LAYNQ6UX15 382 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 RBMS3Q6XE24 437 aaKnown RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 MEX3BQ6ZN04 569 aaKnown RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 FAM92BQ6ZTR7 304 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 PGAP1Q75T13 922 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 HSD17B13Q7Z5P4 300 aaPredicted RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 SPRED1Q7Z699 444 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 FAM160B2Q86V87 743 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 SERINC5Q86VE9 423 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 PAQR7Q86WK9 346 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 SIAH1Q8IUQ4 282 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 DENND6AQ8IWF6 608 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 MCOLN2Q8IZK6 566 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 AMER2Q8N7J2 671 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 CPEB3Q8NE35 698 aaKnown RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 OR8J2Q8NGG1 315 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 MOSPD2Q8NHP6 518 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ZNF431Q8TF32 576 aaPredicted RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 HDAC10Q969S8 669 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ATG4CQ96DT6 458 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 BSCL2Q96G97 398 aaPredicted RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 MARK4Q96L34 752 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 ADAD1Q96M93 576 aaKnown RBP4.02□□□□□ -1.77
CD55-208ENST00000476590 ZNF778Q96MU6 729 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 SFXN2Q96NB2 322 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 NECTIN4Q96NY8 510 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 COL21A1Q96P44 957 aa4.02□□□□□ -1.77
CD55-208ENST00000476590 CASD1Q96PB1 797 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms