RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 GTF2H2CQ6P1K8 395 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 DSELQ8IZU8 1212 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 BANPQ8N9N5 519 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 DPH2Q9BQC3 489 aaPredicted RBP28.22■■■□□ 2.11
HOXB3-208ENST00000476342 SPNS1Q9H2V7 528 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 SYNPO2LQ9H987 977 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 LHX9Q9NQ69 397 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 CUTCQ9NTM9 273 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 GEMIN8Q9NWZ8 242 aaKnown RBP28.22■■■□□ 2.11
HOXB3-208ENST00000476342 MID2Q9UJV3 735 aa28.22■■■□□ 2.11
HOXB3-208ENST00000476342 ANKRD11Q6UB99 2663 aaPredicted RBP28.22■■■□□ 2.11
HOXB3-208ENST00000476342 SEC16AO15027 2179 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 HYKKA2RU49 373 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 LRRC14BA6NHZ5 514 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 MEN1O00255 615 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 LCMT2O60294 686 aaKnown RBP28.21■■■□□ 2.11
HOXB3-208ENST00000476342 PLIN3O60664 434 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 PROCP04070 461 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 SLC35G6P0C7Q6 338 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 MYZAPP0CAP1 466 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 EPORP19235 508 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 RORAP35398 523 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 AHRP35869 848 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 GCGRP47871 477 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 SCTRP47872 440 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 EMP3P54852 163 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 LAPTM5Q13571 262 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 SLBPQ14493 270 aaKnown RBP eCLIP28.21■■■□□ 2.11
HOXB3-208ENST00000476342 TBCCQ15814 346 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 PAGE2BQ5JRK9 111 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 TTLL10Q6ZVT0 673 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 GOLGA7Q7Z5G4 137 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 VN1R4Q7Z5H5 301 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 ASPGQ86U10 573 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 CCDC63Q8NA47 563 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 CAMKVQ8NCB2 501 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 ZNF740Q8NDX6 193 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 RDH11Q8TC12 318 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 CCDC126Q96EE4 140 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 WDR34Q96EX3 536 aa28.21■■■□□ 2.11
HOXB3-208ENST00000476342 DHCR7Q9UBM7 475 aaKnown RBP28.21■■■□□ 2.11
HOXB3-208ENST00000476342 MAP1BP46821 2468 aaKnown RBP28.21■■■□□ 2.11
HOXB3-208ENST00000476342 DLX3O60479 287 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 STAT5AP42229 794 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 PCDH1Q08174 1060 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 DOC2AQ14183 400 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 RBBP5Q15291 538 aaKnown RBP28.2■■■□□ 2.11
HOXB3-208ENST00000476342 MUM1Q2TAK8 710 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 HKDC1Q2TB90 917 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 GARNL3Q5VVW2 1013 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 TMIGD1Q6UXZ0 262 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 TTLQ8NG68 377 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 SLC13A3Q8WWT9 602 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 KIAA1143Q96AT1 154 aaPredicted RBP28.2■■■□□ 2.11
HOXB3-208ENST00000476342 PGM2Q96G03 612 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 ZFP69BQ9UJL9 534 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 PCTPQ9UKL6 214 aa28.2■■■□□ 2.11
HOXB3-208ENST00000476342 RUVBL1Q9Y265 456 aaKnown RBP28.2■■■□□ 2.11
HOXB3-208ENST00000476342 A0A087WV48 116 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 A0A1B0GX78 115 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 GOLGA6L10A6NI86 522 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 RPS17P08708 135 aaKnown RBP28.19■■■□□ 2.1
HOXB3-208ENST00000476342 MYL2P10916 166 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 H2AFXP16104 143 aaPredicted RBP28.19■■■□□ 2.1
HOXB3-208ENST00000476342 AGXTP21549 392 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 ALAS2P22557 587 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 CASP2P42575 452 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 HERVK_113P63132 956 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 HIST2H2ACQ16777 129 aaPredicted RBP28.19■■■□□ 2.1
HOXB3-208ENST00000476342 MANEAQ5SRI9 462 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 HIST2H2AA3Q6FI13 130 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 SPACA3Q8IXA5 215 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 MR1Q95460 341 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 C1QTNF3Q9BXJ4 246 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 ERVK-6Q9BXR3 956 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 STMN4Q9H169 189 aaPredicted RBP28.19■■■□□ 2.1
HOXB3-208ENST00000476342 NT5DC2Q9H857 520 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 IPPKQ9H8X2 491 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 NDOR1Q9UHB4 597 aa28.19■■■□□ 2.1
HOXB3-208ENST00000476342 DSCR3O14972 297 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 P2RX6O15547 441 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 GSTM2P28161 218 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 E2F2Q14209 437 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 NDUFA9Q16795 377 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 BROXQ5VW32 411 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 ZYG11AQ6WRX3 759 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 TRPV3Q8NET8 790 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 TM4SF19Q96DZ7 209 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 GBP5Q96PP8 586 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 EFHD1Q9BUP0 239 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 COPG2Q9UBF2 871 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 PLLPQ9Y342 182 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 ZFHX4Q86UP3 3567 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 UGDHO60701 494 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 PRAMEF4O60810 478 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 WFS1O76024 890 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 PRKAA2P54646 552 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 PWP1Q13610 501 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 PRAMEF9Q5VWM5 478 aa28.18■■■□□ 2.1
HOXB3-208ENST00000476342 ZNF517Q6ZMY9 492 aaPredicted RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms