RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 LPAR4Q99677 370 aa13.6□□□□□ -0.23
CSNK2B-207ENST00000475875 SMARCAL1Q9NZC9 954 aa13.6□□□□□ -0.23
CSNK2B-207ENST00000475875 Q9UFV3 132 aa13.6□□□□□ -0.23
CSNK2B-207ENST00000475875 TRHDEQ9UKU6 1024 aa13.6□□□□□ -0.23
CSNK2B-207ENST00000475875 H0YIG0 161 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 F12P00748 615 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 OR56A5P0C7T3 313 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 ST13P50502 369 aaKnown RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 HLCSP50747 726 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 MSLNQ13421 630 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 SYT16Q17RD7 645 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 MINDY4Q4G0A6 757 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 Q5PR19 223 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 CATSPEREQ5SY80 951 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 LRRC8BQ6P9F7 803 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 PAPD4Q6PIY7 484 aaKnown RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 CXorf67Q86X51 503 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 LIX1LQ8IVB5 337 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 SULF2Q8IWU5 870 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 CIARTQ8N365 385 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 TXLNBQ8N3L3 684 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 CTNNBL1Q8WYA6 563 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 TMEM158Q8WZ71 300 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 MIPEPQ99797 713 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 CDCP1Q9H5V8 836 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 TRPS1Q9UHF7 1281 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 RSPH14Q9UHP6 348 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 FEZ2Q9UHY8 353 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 FOXD3Q9UJU5 478 aaPredicted RBP13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 PCDHA13Q9Y5I0 950 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 PRSS21Q9Y6M0 314 aa13.59□□□□□ -0.23
CSNK2B-207ENST00000475875 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 A0A0A6YYC8 382 aaPredicted RBP13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 I3L1I5 382 aaPredicted RBP13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 PEX1O43933 1283 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 TPP2P29144 1249 aaPredicted RBP13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 UQCRC1P31930 480 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 ADRA1AP35348 466 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 AVPR1BP47901 424 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 ITGA8P53708 1063 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 NDUFA9Q16795 377 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 FBXL19-AS1Q494R0 122 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 TTC23LQ6PF05 361 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 WDR53Q7Z5U6 358 aaPredicted RBP13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 RFX6Q8HWS3 928 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 P3H2Q8IVL5 708 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 PIANPQ8IYJ0 282 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 ARMC2Q8NEN0 867 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 OR2A1Q8NGT9 310 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 RAD51AP1Q96B01 352 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 PIP5K1AQ99755 562 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 PNPLA3Q9NST1 481 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 UVRAGQ9P2Y5 699 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 INTUQ9ULD6 942 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 FAM215AQ9Y5M1 114 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 MRFAP1Q9Y605 127 aa13.58□□□□□ -0.24
CSNK2B-207ENST00000475875 NPIPA2E9PIF3 369 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 NPIPA3F8WFD2 350 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 NRP2O60462 931 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 WDR1O75083 606 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 EPXP11678 715 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 CMPK1P30085 196 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 MAT1AQ00266 395 aaKnown RBP13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 RELAQ04206 551 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 SNTB1Q13884 538 aaKnown RBP13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 USP10Q14694 798 aaKnown RBP13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 HKDC1Q2TB90 917 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 MFSD4BQ5TF39 518 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 PODNL1Q6PEZ8 512 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 RAD9BQ6WBX8 426 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 C16orf47Q6ZP98 133 aaPredicted RBP13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 RGS9BPQ6ZS82 235 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 ARMC10Q8N2F6 343 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 OR52N2Q8NGI0 321 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 ASZ1Q8WWH4 475 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 RNASE6Q93091 150 aaKnown RBP13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 DNAJC1Q96KC8 554 aaKnown RBP13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 PLCD4Q9BRC7 762 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 DPH7Q9BTV6 452 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 GBA3Q9H227 469 aa13.57□□□□□ -0.24
CSNK2B-207ENST00000475875 ZNF407Q9C0G0 2248 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 FCHO1O14526 889 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 GPC4O75487 556 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 PDE9AO76083 593 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 NSA2O95478 260 aaKnown RBP13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 TMEM253P0C7T8 217 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 PKMP14618 531 aaKnown RBP13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 BMP7P18075 431 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 PSMB5P28074 263 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 ADH7P40394 386 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 RFC3P40938 356 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 MLF1P58340 268 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 SLC26A5P58743 744 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 DYNLT1P63172 113 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 MPP1Q00013 466 aa13.56□□□□□ -0.24
CSNK2B-207ENST00000475875 ACTN3Q08043 901 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms