RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 EOGTQ5NDL2 527 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 GCNT7Q6ZNI0 430 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 PAGE2Q7Z2X7 111 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCM2-206ENST00000474617 SNX19Q92543 992 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 SIPA1Q96FS4 1042 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 EGLN2Q96KS0 407 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 RDH12Q96NR8 316 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 CENPKQ9BS16 269 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 ANKRD60Q9BZ19 345 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 BTBD1Q9H0C5 482 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 ZNF696Q9H7X3 374 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 DCAF13Q9NV06 445 aaKnown RBP20.94■□□□□ 0.94
CCM2-206ENST00000474617 SAMD4AQ9UPU9 718 aaKnown RBP20.94■□□□□ 0.94
CCM2-206ENST00000474617 PCDHB11Q9Y5F2 797 aa20.94■□□□□ 0.94
CCM2-206ENST00000474617 RNF103-CHMP3A0A140T963 221 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 LRATO95237 230 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 KLF8O95600 359 aaPredicted RBP20.93■□□□□ 0.94
CCM2-206ENST00000474617 POU3F3P20264 500 aaPredicted RBP20.93■□□□□ 0.94
CCM2-206ENST00000474617 NDUFS1P28331 727 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 CLCNKAP51800 687 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 WNT3P56703 355 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 DLX2Q07687 328 aaPredicted RBP20.93■□□□□ 0.94
CCM2-206ENST00000474617 BIRC2Q13490 618 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 TSTA3Q13630 321 aaPredicted RBP20.93■□□□□ 0.94
CCM2-206ENST00000474617 PDE7AQ13946 482 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 FGL2Q14314 439 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 ADRM1Q16186 407 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 CPZQ66K79 652 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 OR52E8Q6IFG1 317 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 KIAA1211LQ6NV74 962 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 COMMD6Q7Z4G1 85 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 TRIML2Q8N7C3 387 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 OR4K1Q8NGD4 311 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 GOT1L1Q8NHS2 421 aaPredicted RBP20.93■□□□□ 0.94
CCM2-206ENST00000474617 FIG4Q92562 907 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 RNF145Q96MT1 663 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 APOOQ9BUR5 198 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 OSBPL10Q9BXB5 764 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 NDUFA13Q9P0J0 144 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 TDRKHQ9Y2W6 561 aaKnown RBP20.93■□□□□ 0.94
CCM2-206ENST00000474617 OR1A2Q9Y585 309 aa20.93■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3DA0A087WVF3 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3IA0A087WXS9 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3EA0A087X179 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3KA0A087X1G2 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3FA6NER0 549 aaPredicted RBP20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3LB9A6J9 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 CLIC1O00299 241 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 CREG1O75629 220 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 ETHE1O95571 254 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 CEACAM5P06731 702 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3HP0C7X1 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 ACADMP11310 421 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 RAB28P51157 221 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 ABATP80404 500 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 REEP5Q00765 189 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 VEZF1Q14119 521 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 MYBPC3Q14896 1274 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 PYCR3Q53H96 274 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3GQ6DHY5 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3CQ6IPX1 549 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 DNAJC14Q6Y2X3 702 aaPredicted RBP20.92■□□□□ 0.94
CCM2-206ENST00000474617 TRIM69Q86WT6 500 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 CHERPQ8IWX8 916 aaKnown RBP20.92■□□□□ 0.94
CCM2-206ENST00000474617 TBC1D3Q8IZP1 549 aaPredicted RBP20.92■□□□□ 0.94
CCM2-206ENST00000474617 SPDYE1Q8NFV5 336 aaPredicted RBP20.92■□□□□ 0.94
CCM2-206ENST00000474617 OR7A2PQ8NGA2 310 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 SH3KBP1Q96B97 665 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 ZNF764Q96H86 408 aaPredicted RBP20.92■□□□□ 0.94
CCM2-206ENST00000474617 TRAPPC9Q96Q05 1148 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 INPP5KQ9BT40 448 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 MENTQ9BUN1 341 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 RAD21L1Q9H4I0 556 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 ZNF576Q9H609 170 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 DNAJB9Q9UBS3 223 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 RPS6KA6Q9UK32 745 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 VPS4AQ9UN37 437 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 PIAS3Q9Y6X2 628 aa20.92■□□□□ 0.94
CCM2-206ENST00000474617 ANKDD1BA6NHY2 528 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 TBX19O60806 448 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 ADAM23O75077 832 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 HPRP00739 348 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 EGFP01133 1207 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 IGFALSP35858 605 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 LTBRP36941 435 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 ARFIP1P53367 373 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 PLIN5Q00G26 463 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 EPS8Q12929 822 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 NRF1Q16656 503 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 NHSL2Q5HYW2 709 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 CARM1Q86X55 608 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 SVOPLQ8N434 492 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 CBR4Q8N4T8 237 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 SDCCAG3Q96C92 435 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 MYCBPQ99417 103 aaPredicted RBP20.91■□□□□ 0.94
CCM2-206ENST00000474617 IKZF5Q9H5V7 419 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 LIMD1Q9UGP4 676 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 CIDEBQ9UHD4 219 aa20.91■□□□□ 0.94
CCM2-206ENST00000474617 CD207Q9UJ71 328 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms