RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 MYH2Q9UKX2 1941 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CCDC163A0A0D9SF12 145 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MYADML2A6NDP7 307 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 WTIPA6NIX2 430 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OR6C65A6NJZ3 312 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NPIPA2E9PIF3 369 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NPIPA3F8WFD2 350 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PLD2O14939 933 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DPM1O60762 260 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 USP12O75317 370 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZFAND5O76080 213 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MED26O95402 600 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 BPGMP07738 259 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FHP07954 510 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MTHFD1P11586 935 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MATN1P21941 496 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SSTR1P30872 391 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 LCN1P31025 176 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SLC15A1P46059 708 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SPINT3P49223 89 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HERVK_113P63132 956 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DEFB103AP81534 67 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM63BQ5T3F8 832 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DCAF12L1Q5VU92 463 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NCBP2-AS2Q69YL0 99 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM211Q6ICI0 200 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ANKRD26P1Q6NSI1 321 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FBXL6Q8N531 539 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 C19orf18Q8NEA5 215 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OR9A4Q8NGU2 314 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PCDH19Q8TAB3 1148 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SHKBP1Q8TBC3 707 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MDM1Q8TC05 714 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NEK7Q8TDX7 302 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FRS2Q8WU20 508 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF75CPQ92670 426 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 EXOSC8Q96B26 276 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 MMABQ96EY8 250 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FCRL4Q96PJ5 515 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 LMF2Q9BU23 707 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ACAT2Q9BWD1 397 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ERVK-6Q9BXR3 956 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HPS4Q9NQG7 708 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PIGVQ9NUD9 493 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TBC1D23Q9NUY8 699 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ALKBH4Q9NXW9 302 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PTBP2Q9UKA9 531 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RAB21Q9UL25 225 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TMEM14AQ9Y6G1 99 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF831Q5JPB2 1677 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 A0A1W2PPH5 198 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RCCD1A6NED2 376 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 LINC01387J3KSC0 135 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 EMC8O43402 210 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GSTT2P0CG29 244 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GSTT2BP0CG30 244 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ABOP16442 354 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 HOXA11P31270 313 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 FEN1P39748 380 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DNASE1L1P49184 302 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TAS2R43P59537 309 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 AP3S2P59780 193 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DNAJB13P59910 316 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 RPS23P62266 143 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CYP4F2P78329 520 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 SPIBQ01892 262 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GBE1Q04446 702 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 CYP4F3Q08477 520 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PLCXD2Q0VAA5 305 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ST3GAL3Q11203 375 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ASTLQ6HA08 431 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ADGRD1Q6QNK2 874 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 LAYNQ6UX15 382 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 DPY19L3Q6ZPD9 716 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF100Q8IYN0 542 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 OR4E2Q8NGC2 313 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF384Q8TF68 577 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TWIST2Q8WVJ9 160 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 GAL3ST3Q96A11 431 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 PTCHD1Q96NR3 888 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NPLQ9BXD5 320 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 NOL11Q9H8H0 719 aaKnown RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 ADAM29Q9UKF5 820 aa4.48□□□□□ -1.69
CCNL1-215ENST00000474539 POLR3HQ9Y535 204 aaPredicted RBP4.48□□□□□ -1.69
CCNL1-215ENST00000474539 TCRBV9S1A1TA0A576 114 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 ELOVL7A1L3X0 281 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 VSTM2BA6NLU5 285 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF891A8MT65 544 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 MID1O15344 667 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 SEC14L5O43304 696 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF208O43345 1280 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 TRAPPC6AO75865 159 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 HSMCR30P0CW71 290 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 SAGP10523 405 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 MAPK3P27361 379 aaPredicted RBP4.47□□□□□ -1.69
CCNL1-215ENST00000474539 SLC1A2P43004 574 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 KIR2DL3P43628 341 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 GPR3P46089 330 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 CLCN2P51788 898 aa4.47□□□□□ -1.69
CCNL1-215ENST00000474539 BTN3A2P78410 334 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms