RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 PLD3Q8IV08 490 aa16.37■□□□□ 0.21
CUL4A-208ENST00000474116 EID3Q8N140 333 aa16.37■□□□□ 0.21
CUL4A-208ENST00000474116 HORMAD2Q8N7B1 307 aa16.37■□□□□ 0.21
CUL4A-208ENST00000474116 CALR3Q96L12 384 aaKnown RBP16.37■□□□□ 0.21
CUL4A-208ENST00000474116 PKP4Q99569 1192 aa16.37■□□□□ 0.21
CUL4A-208ENST00000474116 LRFN1Q9P244 771 aa16.37■□□□□ 0.21
CUL4A-208ENST00000474116 TSR3Q9UJK0 312 aaKnown RBP16.37■□□□□ 0.21
CUL4A-208ENST00000474116 TCRBV7S2A1N4TA0A589 114 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 CDK2AP1O14519 115 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 NME2P1O60361 137 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 NDUFS3O75489 264 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 CCNDBP1O95273 360 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 NME2P22392 152 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 DNAJA1P31689 397 aaKnown RBP16.36■□□□□ 0.21
CUL4A-208ENST00000474116 PTGER1P34995 402 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 XCR1P46094 333 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 PNLIPRP1P54315 467 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 EIF3BP55884 814 aaKnown RBP16.36■□□□□ 0.21
CUL4A-208ENST00000474116 OC90Q02509 493 aaPredicted RBP16.36■□□□□ 0.21
CUL4A-208ENST00000474116 MAPKAPK3Q16644 382 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 DMRTC2Q8IXT2 367 aaPredicted RBP16.36■□□□□ 0.21
CUL4A-208ENST00000474116 LGI4Q8N135 537 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 MPP5Q8N3R9 675 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 CPSF7Q8N684 471 aaKnown RBP16.36■□□□□ 0.21
CUL4A-208ENST00000474116 SLC5A8Q8N695 610 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 LRRC57Q8N9N7 239 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 TC2NQ8N9U0 490 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 PPFIBP2Q8ND30 876 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 LILRB4Q8NHJ6 448 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 TREX1Q9NSU2 369 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 GALPQ9UBC7 116 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 DNHD1Q96M86 4753 aa16.36■□□□□ 0.21
CUL4A-208ENST00000474116 SPG11Q96JI7 2443 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 FOXO6A8MYZ6 492 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 E7ENX8 843 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 NIPSNAP2O75323 286 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 TOXO94900 526 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 STATHP02808 62 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 ZNF24P17028 368 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 HSD17B2P37059 387 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 FDFT1P37268 417 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 BCL6P41182 706 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 ABATP80404 500 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 TAP2Q03519 686 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 TSTA3Q13630 321 aaPredicted RBP16.35■□□□□ 0.21
CUL4A-208ENST00000474116 SPA17Q15506 151 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 SFT2D3Q587I9 215 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 ACSBG2Q5FVE4 666 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 PAPD4Q6PIY7 484 aaKnown RBP16.35■□□□□ 0.21
CUL4A-208ENST00000474116 VN1R4Q7Z5H5 301 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 LRRC56Q8IYG6 542 aaPredicted RBP16.35■□□□□ 0.21
CUL4A-208ENST00000474116 CCDC170Q8IYT3 715 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 PPHLN1Q8NEY8 458 aaKnown RBP16.35■□□□□ 0.21
CUL4A-208ENST00000474116 FAM57AQ8TBR7 257 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 ZNF480Q8WV37 535 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 CXXC4Q9H2H0 198 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 CDCP1Q9H5V8 836 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 HCN3Q9P1Z3 774 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 MAP1AP78559 2803 aaPredicted RBP16.35■□□□□ 0.21
CUL4A-208ENST00000474116 NAV3Q8IVL0 2385 aa16.35■□□□□ 0.21
CUL4A-208ENST00000474116 KCNE1BA0A087WTH5 132 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 NKX2-6A6NCS4 301 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 SGK494L7N484 410 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 SLC25A12O75746 678 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 SLC16A8O95907 504 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 FMO4P31512 558 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 STIP1P31948 543 aaKnown RBP16.34■□□□□ 0.21
CUL4A-208ENST00000474116 IST1P53990 364 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 RHAGQ02094 409 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 USP10Q14694 798 aaKnown RBP16.34■□□□□ 0.21
CUL4A-208ENST00000474116 KLHL38Q2WGJ6 581 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 PCID2Q5JVF3 399 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 TMEM214Q6NUQ4 689 aaKnown RBP16.34■□□□□ 0.21
CUL4A-208ENST00000474116 CEP128Q6ZU80 1094 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 MMP21Q8N119 569 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 PLPP5Q8NEB5 264 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 ELP5Q8TE02 316 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 ASB5Q8WWX0 329 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 LPGAT1Q92604 370 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 NRGNQ92686 78 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 FAM136AQ96C01 138 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 EBNA1BP2Q99848 306 aaKnown RBP16.34■□□□□ 0.21
CUL4A-208ENST00000474116 MACROD1Q9BQ69 325 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 UCK2Q9BZX2 261 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 TRIM45Q9H8W5 580 aaPredicted RBP16.34■□□□□ 0.21
CUL4A-208ENST00000474116 FAM114A2Q9NRY5 505 aa16.34■□□□□ 0.21
CUL4A-208ENST00000474116 A0A1B0GTH9 108 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 GRID2IPA4D2P6 1211 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 BTNL10A8MVZ5 291 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 E7EVH7 732 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 H7BY64 318 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 SMAPO00193 183 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
CUL4A-208ENST00000474116 IL1RNP18510 177 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 ARNTP27540 789 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 NMBRP28336 390 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 MSX1P28360 303 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 TPP2P29144 1249 aaPredicted RBP16.33■□□□□ 0.2
CUL4A-208ENST00000474116 PTGS2P35354 604 aa16.33■□□□□ 0.2
CUL4A-208ENST00000474116 SLC26A5P58743 744 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms