RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RECKO95980 971 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 KRT15P19012 456 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 WT1P19544 449 aaPredicted RBP13.11□□□□□ -0.31
USF1-205ENST00000473969 GCAP28676 217 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 HSD17B3P37058 310 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 BCL6P41182 706 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 FOLR3P41439 243 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 MAGEA12P43365 314 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 AVPR1BP47901 424 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 KCNC1P48547 511 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 CSRP3P50461 194 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 CYP4F2P78329 520 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 OCA2Q04671 838 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 RGS1Q08116 209 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 CDC20Q12834 499 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 COL9A2Q14055 689 aaPredicted RBP13.11□□□□□ -0.31
USF1-205ENST00000473969 SLC9A5Q14940 896 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 HKDC1Q2TB90 917 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 FBXO48Q5FWF7 155 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 XKR6Q5GH73 641 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 PAGE2BQ5JRK9 111 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
USF1-205ENST00000473969 LCN10Q6JVE6 187 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 LCA5Q86VQ0 697 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 METTL27Q8N6F8 245 aaPredicted RBP13.11□□□□□ -0.31
USF1-205ENST00000473969 TRPV3Q8NET8 790 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 TTLQ8NG68 377 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 OR4K1Q8NGD4 311 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 ACMSDQ8TDX5 336 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 ESAMQ96AP7 390 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 MRPL57Q9BQC6 102 aaKnown RBP13.11□□□□□ -0.31
USF1-205ENST00000473969 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 PARD6BQ9BYG5 372 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 DRC3Q9H069 523 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 EPB41L4BQ9H329 900 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 TCFL5Q9UL49 500 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 POLHQ9Y253 713 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 MAU2Q9Y6X3 613 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 PCM1Q15154 2024 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 DMXL2Q8TDJ6 3036 aa13.11□□□□□ -0.31
USF1-205ENST00000473969 TLDC2A0PJX2 215 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 K7EPI3 171 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 TERTO14746 1132 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 LCMT2O60294 686 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 ALBP02768 609 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 STATHP02808 62 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 SHBGP04278 402 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ITGB2P05107 769 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 EPB42P16452 691 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 TAC1P20366 129 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ITGAXP20702 1163 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 AHRP35869 848 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 SLCO1A2P46721 670 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 OR1D4P47884 311 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 PIK3CGP48736 1102 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ALDH18A1P54886 795 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 RPS18P62269 152 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 SKP1P63208 163 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 REEP5Q00765 189 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 IRF8Q02556 426 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 LAPTM5Q13571 262 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 TECRLQ5HYJ1 363 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ATG9BQ674R7 924 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 FAM198BQ6UWH4 519 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 OVCH1Q7RTY7 1134 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 RAB43Q86YS6 212 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 PLD6Q8N2A8 252 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 UBTD2Q8WUN7 234 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 FKBP10Q96AY3 582 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 MMABQ96EY8 250 aaPredicted RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 RUFY1Q96T51 708 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 SARGQ9BW04 601 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 PITHD1Q9GZP4 211 aaPredicted RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 MRPL46Q9H2W6 279 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 EHD1Q9H4M9 534 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ZNF358Q9NW07 568 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 DCDC2Q9UHG0 476 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ZFP69BQ9UJL9 534 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 PTRH2Q9Y3E5 179 aaKnown RBP13.1□□□□□ -0.31
USF1-205ENST00000473969 PKD1L2Q7Z442 2459 aa13.1□□□□□ -0.31
USF1-205ENST00000473969 ANKDD1BA6NHY2 528 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
USF1-205ENST00000473969 ERVH48-1M5A8F1 160 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 NDUFS4O43181 175 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 CDH16O75309 829 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 RFPL1O75677 317 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 ARL1P40616 181 aaPredicted RBP13.09□□□□□ -0.31
USF1-205ENST00000473969 GCGRP47871 477 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 SCTRP47872 440 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 AGTR2P50052 363 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 PWP1Q13610 501 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 FAM53BQ14153 422 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 SLBPQ14493 270 aaKnown RBP eCLIP13.09□□□□□ -0.31
USF1-205ENST00000473969 SSPNQ14714 243 aa13.09□□□□□ -0.31
USF1-205ENST00000473969 SETDB1Q15047 1291 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms