RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PNMA8BQ9ULN7 279 aaPredicted RBP10.58□□□□□ -0.72
C9orf3-214ENST00000473778 OR2AG2A6NM03 316 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 DNAJB5O75953 348 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 FKBP9O95302 570 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 SOD2P04179 222 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 COX7A2P14406 83 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ATP1B2P14415 290 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 JUPP14923 745 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 PRPS1L1P21108 318 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 C21orf33P30042 268 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 RPP38P78345 283 aaKnown RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 CDKL4Q5MAI5 379 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 FAHD1Q6P587 224 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 AHSA2Q719I0 299 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 SYNPOQ8N3V7 929 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 OR8J2Q8NGG1 315 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 CD99L2Q8TCZ2 262 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 BRD9Q9H8M2 597 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 TPT1P8Q9HAU6 139 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 AMBNQ9NP70 447 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 POLE4Q9NR33 117 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 KRT84Q9NSB2 600 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 DNAJC11Q9NVH1 559 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 GPATCH2Q9NW75 528 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 PCDHGA6Q9Y5G7 932 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 C1orf226A1L170 272 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 PRAMEF25A6NGN4 478 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 GABRR3A8MPY1 467 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 TTC34A8MYJ7 566 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 EVPLLA8MZ36 301 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 SLC22A1O15245 554 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 HOXA2O43364 376 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 EPN2O95208 641 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 VIPP01282 170 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 INHAP05111 366 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 CKMP06732 381 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 C8GP07360 202 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 OR56A5P0C7T3 313 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 GABRR2P28476 465 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 LIPAP38571 399 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ITGA1P56199 1179 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 CXCR4P61073 352 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 NPRL3Q12980 569 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 CAMK2GQ13555 558 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ZNF846Q147U1 533 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 VEPH1Q14D04 833 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 TRIM16LQ309B1 348 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 KIAA1614Q5VZ46 1190 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 TPGS2Q68CL5 300 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 C22orf39Q6P5X5 142 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ZNF852Q6ZMS4 543 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 EIF3MQ7L2H7 374 aaKnown RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 TSPYL5Q86VY4 417 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 LMNTD1Q8N9Z9 388 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ATG16L2Q8NAA4 619 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 SETD9Q8NE22 299 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 FIBINQ8TAL6 211 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 CLIP3Q96DZ5 547 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ZBTB20Q9HC78 741 aaPredicted RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 RLIMQ9NVW2 624 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 GIN1Q9NXP7 522 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 ABT1Q9ULW3 272 aaKnown RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 EXO1Q9UQ84 846 aaKnown RBP10.57□□□□□ -0.72
C9orf3-214ENST00000473778 PPIL1Q9Y3C6 166 aa10.57□□□□□ -0.72
C9orf3-214ENST00000473778 OR2A25A4D2G3 310 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 ARHGEF33A8MVX0 844 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 PCDH7O60245 1069 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 PQBP1O60828 265 aaKnown RBP10.56□□□□□ -0.72
C9orf3-214ENST00000473778 AOC2O75106 756 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 NTRK1P04629 796 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HIST1H2AGP0C0S8 130 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HIST1H2ADP20671 130 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 TGM1P22735 817 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 MAPK8P45983 427 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 TRPC1P48995 793 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HNMTP50135 292 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 IRF8Q02556 426 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 DOC2AQ14183 400 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 SYT16Q17RD7 645 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 GPR153Q6NV75 609 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 Q6ZVU0 165 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 USP45Q70EL2 814 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 DSG4Q86SJ6 1040 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HORMAD1Q86X24 394 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 RASGRP3Q8IV61 690 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 CCDC103Q8IW40 242 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 CADM3Q8N126 398 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 OR6Q1Q8NGQ2 317 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 CSGALNACT1Q8TDX6 532 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 VWCEQ96DN2 955 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HIST1H2AHQ96KK5 128 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 PITX2Q99697 317 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HIST1H2AJQ99878 128 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 H2AFJQ9BTM1 129 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 HMG20AQ9NP66 347 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 NECTIN3Q9NQS3 549 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 FBXO8Q9NRD0 319 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 ATAD3AQ9NVI7 634 aa10.56□□□□□ -0.72
C9orf3-214ENST00000473778 SPATA6Q9NWH7 488 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-214ENST00000473778 KLHL42Q9P2K6 505 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms