RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 Q71RC1 249 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 CRLF3Q8IUI8 442 aa8.79□□□□□ -1
VCL-204ENST00000472585 LRRC56Q8IYG6 542 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 MARVELD2Q8N4S9 558 aa8.79□□□□□ -1
VCL-204ENST00000472585 PPFIBP2Q8ND30 876 aa8.79□□□□□ -1
VCL-204ENST00000472585 OR9A4Q8NGU2 314 aa8.79□□□□□ -1
VCL-204ENST00000472585 ATG4AQ8WYN0 398 aa8.79□□□□□ -1
VCL-204ENST00000472585 FAM136AQ96C01 138 aa8.79□□□□□ -1
VCL-204ENST00000472585 PPP1R2P1Q96PQ5 205 aa8.79□□□□□ -1
VCL-204ENST00000472585 ALS2CR12Q96Q35 445 aa8.79□□□□□ -1
VCL-204ENST00000472585 FERMT1Q9BQL6 677 aa8.79□□□□□ -1
VCL-204ENST00000472585 TUBB6Q9BUF5 446 aa8.79□□□□□ -1
VCL-204ENST00000472585 MKKSQ9NPJ1 570 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 PACSIN2Q9UNF0 486 aaPredicted RBP8.79□□□□□ -1
VCL-204ENST00000472585 CDC14AQ9UNH5 594 aa8.79□□□□□ -1
VCL-204ENST00000472585 TCAF1Q9Y4C2 921 aa8.79□□□□□ -1
VCL-204ENST00000472585 FAM169AQ9Y6X4 670 aa8.79□□□□□ -1
VCL-204ENST00000472585 SOWAHDA6NJG2 315 aa8.78□□□□□ -1
VCL-204ENST00000472585 HAT1O14929 419 aa8.78□□□□□ -1
VCL-204ENST00000472585 CD3EAPO15446 510 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 PSMD3O43242 534 aa8.78□□□□□ -1
VCL-204ENST00000472585 NIPSNAP2O75323 286 aa8.78□□□□□ -1
VCL-204ENST00000472585 F7P08709 466 aaPredicted RBP8.78□□□□□ -1
VCL-204ENST00000472585 C8orf89P0DMQ9 161 aa8.78□□□□□ -1
VCL-204ENST00000472585 IGFBP2P18065 325 aa8.78□□□□□ -1
VCL-204ENST00000472585 DNASE1P24855 282 aa8.78□□□□□ -1
VCL-204ENST00000472585 NMBRP28336 390 aa8.78□□□□□ -1
VCL-204ENST00000472585 EEF1DP29692 281 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 PRDX1Q06830 199 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 TFF3Q07654 80 aa8.78□□□□□ -1
VCL-204ENST00000472585 OR1C1Q15619 314 aa8.78□□□□□ -1
VCL-204ENST00000472585 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
VCL-204ENST00000472585 BTBD16Q32M84 506 aa8.78□□□□□ -1
VCL-204ENST00000472585 ACSBG2Q5FVE4 666 aa8.78□□□□□ -1
VCL-204ENST00000472585 PLAG1Q6DJT9 500 aa8.78□□□□□ -1
VCL-204ENST00000472585 DESI1Q6ICB0 168 aa8.78□□□□□ -1
VCL-204ENST00000472585 VN1R4Q7Z5H5 301 aa8.78□□□□□ -1
VCL-204ENST00000472585 CPEB2Q7Z5Q1 589 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 ANKRD37Q7Z713 158 aa8.78□□□□□ -1
VCL-204ENST00000472585 LINC00523Q86TU6 105 aa8.78□□□□□ -1
VCL-204ENST00000472585 PDSS2Q86YH6 399 aa8.78□□□□□ -1
VCL-204ENST00000472585 DMRTC2Q8IXT2 367 aaPredicted RBP8.78□□□□□ -1
VCL-204ENST00000472585 GHDCQ8N2G8 530 aa8.78□□□□□ -1
VCL-204ENST00000472585 FAM98AQ8NCA5 519 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 LRRN4CLQ8ND94 238 aa8.78□□□□□ -1
VCL-204ENST00000472585 OR9A1PQ8NGU1 263 aa8.78□□□□□ -1
VCL-204ENST00000472585 ASB5Q8WWX0 329 aa8.78□□□□□ -1
VCL-204ENST00000472585 MVB12AQ96EY5 273 aa8.78□□□□□ -1
VCL-204ENST00000472585 PKP4Q99569 1192 aa8.78□□□□□ -1
VCL-204ENST00000472585 SLC30A3Q99726 388 aa8.78□□□□□ -1
VCL-204ENST00000472585 MDFIQ99750 246 aa8.78□□□□□ -1
VCL-204ENST00000472585 RAB11FIP5Q9BXF6 653 aa8.78□□□□□ -1
VCL-204ENST00000472585 MRPS30Q9NP92 439 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 KCNJ16Q9NPI9 418 aa8.78□□□□□ -1
VCL-204ENST00000472585 DLL4Q9NR61 685 aa8.78□□□□□ -1
VCL-204ENST00000472585 TREX1Q9NSU2 369 aa8.78□□□□□ -1
VCL-204ENST00000472585 CATSPERZQ9NTU4 200 aa8.78□□□□□ -1
VCL-204ENST00000472585 C14orf105Q9NVL8 296 aa8.78□□□□□ -1
VCL-204ENST00000472585 DNAJB12Q9NXW2 375 aaKnown RBP8.78□□□□□ -1
VCL-204ENST00000472585 TAC3Q9UHF0 121 aa8.78□□□□□ -1
VCL-204ENST00000472585 RPH3AQ9Y2J0 694 aaPredicted RBP8.78□□□□□ -1
VCL-204ENST00000472585 NKX2-6A6NCS4 301 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 FAM90A27PA6NNH2 459 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 GOLGA8KD6RF30 607 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 E7ENX8 843 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 GOLGA8TH3BQL2 631 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 MYO1CO00159 1063 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 CBFA2T2O43439 604 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 PSIP1O75475 530 aaKnown RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 TPM3P06753 285 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 ERVK-10P10266 1014 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 RPS3P23396 243 aaKnown RBP eCLIP8.77□□□□□ -1.017e-23■■■■□ 22.8
VCL-204ENST00000472585 CMPK1P30085 196 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 ADSLP30566 484 aaPredicted RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 FMO4P31512 558 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 MEOX1P50221 254 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 DGKQP52824 942 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 TAP2Q03519 686 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 FAM53BQ14153 422 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 KCNJ11Q14654 390 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 OASLQ15646 514 aaKnown RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 P3H1Q32P28 736 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 GARNL3Q5VVW2 1013 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 ICE2Q659A1 982 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 PTRHD1Q6GMV3 140 aaKnown RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 TTC23LQ6PF05 361 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 CES3Q6UWW8 571 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 CEP128Q6ZU80 1094 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 GALNTL5Q7Z4T8 443 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 CNGA4Q8IV77 575 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 RPRMLQ8N4K4 120 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 KIF2BQ8N4N8 673 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 CPSF7Q8N684 471 aaKnown RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 OR51Q1Q8NH59 317 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 SPATA3Q8NHX4 192 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 ZNF480Q8WV37 535 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 SKA2Q8WVK7 121 aaPredicted RBP8.77□□□□□ -1.01
VCL-204ENST00000472585 SMPDL3AQ92484 453 aa8.77□□□□□ -1.01
VCL-204ENST00000472585 ZNF354BQ96LW1 612 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms