RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 RAP2CQ9Y3L5 183 aa16.15■□□□□ 0.18
CCM2-205ENST00000472223 KCNE1BA0A087WTH5 132 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 CCDC187A0A096LP49 1063 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 EFCAB7A8K855 629 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 PPP6CO00743 305 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 POLR3GO15318 223 aaPredicted RBP16.14■□□□□ 0.17
CCM2-205ENST00000472223 EIF2S1P05198 315 aaKnown RBP16.14■□□□□ 0.17
CCM2-205ENST00000472223 CHRNGP07510 517 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 SCTRP47872 440 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 ZNF33BQ06732 778 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 RGS1Q08116 209 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 TUBB3Q13509 450 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 TUBB8Q3ZCM7 444 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 TMEM164Q5U3C3 297 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 LETMD1Q6P1Q0 360 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 RNF44Q7L0R7 432 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 RAB11FIP2Q7L804 512 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 PLD3Q8IV08 490 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 DNAJC22Q8N4W6 341 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 OR6Y1Q8NGX8 325 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 OR8K5Q8NH50 307 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 WDR36Q8NI36 951 aaKnown RBP16.14■□□□□ 0.17
CCM2-205ENST00000472223 LIN37Q96GY3 246 aaPredicted RBP16.14■□□□□ 0.17
CCM2-205ENST00000472223 OR6C1Q96RD1 312 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 SARGQ9BW04 601 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 FGF21Q9NSA1 209 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 ZFP69BQ9UJL9 534 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 RARRES3Q9UL19 164 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 TRAF6Q9Y4K3 522 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 AP1M2Q9Y6Q5 423 aa16.14■□□□□ 0.17
CCM2-205ENST00000472223 TMEM150CB9EJG8 249 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 SLCO1B7G3V0H7 640 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 AGRPO00253 132 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 UBFD1O14562 309 aaKnown RBP16.13■□□□□ 0.17
CCM2-205ENST00000472223 FFAR3O14843 346 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 POLR1CO15160 346 aaPredicted RBP16.13■□□□□ 0.17
CCM2-205ENST00000472223 GPR42O15529 346 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 FGF4P08620 206 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 MSL3P1P0C860 447 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 CCR10P46092 362 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 RPL14P50914 215 aaKnown RBP16.13■□□□□ 0.17
CCM2-205ENST00000472223 ITGA1P56199 1179 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 VSX2P58304 361 aaPredicted RBP16.13■□□□□ 0.17
CCM2-205ENST00000472223 GUCY1A3Q02108 690 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 TGM3Q08188 693 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 TARDBPQ13148 414 aaKnown RBP eCLIP16.13■□□□□ 0.17
CCM2-205ENST00000472223 DDX39BQ13838 428 aaKnown RBP16.13■□□□□ 0.17
CCM2-205ENST00000472223 E2F2Q14209 437 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 IL11RAQ14626 422 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 KCNAB1Q14722 419 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 C16orf72Q14CZ0 275 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 ZIC1Q15915 447 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 MANEAQ5SRI9 462 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 FRG2Q64ET8 278 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 ASPGQ86U10 573 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 LAS2Q8IYD9 372 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 TTC29Q8NA56 475 aaPredicted RBP16.13■□□□□ 0.17
CCM2-205ENST00000472223 OR7G3Q8NG95 312 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 AGR3Q8TD06 166 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 SLC13A3Q8WWT9 602 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 SELENOMQ8WWX9 145 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 FRG2BQ96QU4 278 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 FAM60AQ9NP50 221 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 PILRAQ9UKJ1 303 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 LOXL2Q9Y4K0 774 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 PCDHGA4Q9Y5G9 962 aa16.13■□□□□ 0.17
CCM2-205ENST00000472223 H0YGG7 62 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 NDUFS4O43181 175 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 ITM2AO43736 263 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 PRAMEF10O60809 474 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 CTSVO60911 334 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 CLEC3AO75596 197 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 LYPLA1O75608 230 aaPredicted RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 OR2B3O76000 313 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 VIMP08670 466 aaKnown RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 FOLR1P15328 257 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 BCL6P41182 706 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 PIK3CBP42338 1070 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 HK2P52789 917 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 RAB15P59190 212 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 ARF3P61204 181 aaPredicted RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 STXBP1P61764 594 aaKnown RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 PWP1Q13610 501 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 GRM7Q14831 915 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 GPR19Q15760 415 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 NDUFA9Q16795 377 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 IMPG1Q17R60 797 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 DEFB110Q30KQ9 67 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 FAM214AQ32MH5 1076 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 SGO1Q5FBB7 561 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 TLDC1Q6P9B6 456 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 FOXR1Q6PIV2 292 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 RGS9BPQ6ZS82 235 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 CHSY3Q70JA7 882 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 PPP1R3BQ86XI6 285 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 WDR75Q8IWA0 830 aaKnown RBP16.12■□□□□ 0.17
CCM2-205ENST00000472223 LSMEM2Q8N112 164 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 CSNK1A1LQ8N752 337 aa16.12■□□□□ 0.17
CCM2-205ENST00000472223 ZNF740Q8NDX6 193 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms