RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 TRAPPC9Q96Q05 1148 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 ACPTQ9BZG2 426 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 WDR55Q9H6Y2 383 aaPredicted RBP18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 DMRT3Q9NQL9 472 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 FARSBQ9NSD9 589 aaKnown RBP18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 SIRT5Q9NXA8 310 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 PCDHGA4Q9Y5G9 962 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 PTGDR2Q9Y5Y4 395 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 AP1M2Q9Y6Q5 423 aa18.63■□□□□ 0.57
CHMP2B-204ENST00000472024 HAT1O14929 419 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 LSM1O15116 133 aaKnown RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 CAPN5O15484 640 aaPredicted RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 RGS14O43566 566 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 TBX6O95947 436 aaPredicted RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 LINC00032P0C843 101 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 MYF5P13349 255 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 CKMT2P17540 419 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 CSF2RBP32927 897 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 BCL6P41182 706 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 ZIC1Q15915 447 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 LSM12Q3MHD2 195 aaKnown RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 FBXO42Q6P3S6 717 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 DDIASQ8IXT1 998 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 PIAS4Q8N2W9 510 aaPredicted RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 CREB3L4Q8TEY5 395 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 C11orf24Q96F05 449 aaPredicted RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 AKTIPQ9H8T0 292 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 RXFP3Q9NSD7 469 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 FAM86C1Q9NVL1 165 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 ASIC5Q9NY37 505 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 ZFP69BQ9UJL9 534 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 RP1P56715 2156 aa18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 ASCC3Q8N3C0 2202 aaKnown RBP18.62■□□□□ 0.57
CHMP2B-204ENST00000472024 RRP9O43818 475 aaKnown RBP18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 LCMT2O60294 686 aaKnown RBP18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 SEMA3DO95025 777 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 LDOC1O95751 146 aaPredicted RBP18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 ALDH4A1P30038 563 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 NEK2P51955 445 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 ARFIP1P53367 373 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 PHEXP78562 749 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 MEF2AQ02078 507 aaPredicted RBP18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 CUL3Q13618 768 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 KIAA0040Q15053 153 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 ADPRMQ3LIE5 342 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 FAM91A1Q658Y4 838 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 KMT5CQ86Y97 462 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 C19orf47Q8N9M1 422 aaKnown RBP18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 CCT6BQ92526 530 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 TM4SF19Q96DZ7 209 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 CNDP2Q96KP4 475 aaKnown RBP18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 PPP3R2Q96LZ3 170 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 PPM1MQ96MI6 270 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 OR2A5Q96R48 311 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 CCDC3Q9BQI4 270 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 MYLK2Q9H1R3 596 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 ZNF385DQ9H6B1 395 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 FRYLO94915 3013 aa18.61■□□□□ 0.57
CHMP2B-204ENST00000472024 A0A1W2PQM1 296 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 MAGEB17A8MXT2 336 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 NTN3O00634 580 aaPredicted RBP18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 NRP2O60462 931 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 CTSVO60911 334 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 ANKRD34CP0C6C1 535 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 MSL3P1P0C860 447 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 ST6GAL1P15907 406 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 PCSK2P16519 638 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 LBPP18428 481 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 GFERP55789 205 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 C6orf136Q5SQH8 315 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 NKAIN2Q5VXU1 208 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 ADNP2Q6IQ32 1131 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 IRGCQ6NXR0 463 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 TMEM71Q6P5X7 295 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 VN1R4Q7Z5H5 301 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 ZFAND4Q86XD8 727 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 NAXDQ8IW45 347 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 PARP9Q8IXQ6 854 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 TRPV3Q8NET8 790 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 IFI44Q8TCB0 444 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 NT5CQ8TCD5 201 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 CMTM7Q96FZ5 175 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 TCTN2Q96GX1 697 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 AHCYL2Q96HN2 611 aaKnown RBP18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 ZNF285Q96NJ3 590 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 SERPINI1Q99574 410 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 MAP3K3Q99759 626 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 ZFYVE21Q9BQ24 234 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 MS4A8Q9BY19 250 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 LRRN3Q9H3W5 708 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 SYNPO2LQ9H987 977 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 MRGBPQ9NV56 204 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 VPS29Q9UBQ0 182 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 TMED5Q9Y3A6 229 aa18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 EP300Q09472 2414 aaPredicted RBP18.6■□□□□ 0.57
CHMP2B-204ENST00000472024 GOLGA8QA0A0J9YX86 632 aa18.59■□□□□ 0.57
CHMP2B-204ENST00000472024 FEZF1A0PJY2 475 aa18.59■□□□□ 0.57
CHMP2B-204ENST00000472024 CPED1A4D0V7 1026 aa18.59■□□□□ 0.57
CHMP2B-204ENST00000472024 GOLGA8OA6NCC3 632 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms