RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 HERV-K104P61576 105 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EVX2Q03828 476 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KLF10Q13118 480 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 AIMP2Q13155 320 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MBLAC2Q68D91 279 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NPLOC4Q8TAT6 608 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CLEC4CQ8WTT0 213 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 STRADBQ9C0K7 418 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RC3H2Q9HBD1 1191 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ARL8BQ9NVJ2 186 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF860A6NHJ4 632 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RPL5P46777 297 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HMGCS1Q01581 520 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GRK1Q15835 563 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TYSND1Q2T9J0 566 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRTOMTQ8WZ04 291 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ACSS3Q9H6R3 686 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NOP16Q9Y3C1 178 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SGCEO43556 437 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRKAR1BP31321 381 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IFI44LQ53G44 452 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FSTL4Q6MZW2 842 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 POGLUT1Q8NBL1 392 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ZNF578Q96N58 590 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ERMAPQ96PL5 475 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TUBGCP5Q96RT8 1024 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NODALQ96S42 347 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 NMUR2Q9GZQ4 415 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C14orf105Q9NVL8 296 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PCDHGB7Q9Y5F8 929 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BBIP1A8MTZ0 92 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PIM1P11309 404 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CHRNA4P43681 627 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CRISP3P54108 245 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RAB8AP61006 207 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TLE2Q04725 743 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DNM1P34Q6PK57 102 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FRMD7Q6ZUT3 714 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DUSP26Q9BV47 211 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MAGEH1Q9H213 219 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRRC19Q9H756 370 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MED11Q9P086 117 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CLUHO75153 1309 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BAZ2AQ9UIF9 1905 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CLCA1A8K7I4 914 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 EIF4EP06730 217 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ADAM17P78536 824 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ANKRD23Q86SG2 305 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CMTM8Q8IZV2 173 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PLD5Q8N7P1 536 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MFSD2AQ8NA29 543 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DCAKDQ8WVC6 231 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GCDHQ92947 438 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 KAZALD1Q96I82 304 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TRMOQ9BU70 441 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FARSBQ9NSD9 589 aaKnown RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LAMP5Q9UJQ1 280 aa12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DNMT3AQ9Y6K1 912 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 S100PP25815 95 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GNRHRP30968 328 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CRHR1P34998 444 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 GGT5P36269 586 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRRC37A5PQ49AS3 106 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRAMEF14Q5SWL7 426 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PRAMEF13Q5VWM6 474 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ALDH16A1Q8IZ83 802 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BEX2Q9BXY8 128 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 BEX1Q9HBH7 125 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FASLGP48023 281 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 HNRNPKP61978 463 aaKnown RBP eCLIP12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CCL14Q16627 93 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FAM160A2Q8N612 972 aaPredicted RBP12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CPNE2Q96FN4 548 aaPredicted RBP12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC25A51Q9H1U9 297 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ATXN10Q9UBB4 475 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CYP8B1Q9UNU6 501 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TCAF1Q9Y4C2 921 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 CXCR6O00574 342 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 MT-ND5P03915 603 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 OGNP20774 298 aaKnown RBP12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 RPL11P62913 178 aaKnown RBP12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SCARB2Q14108 478 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SGCAQ16586 387 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRRC38Q5VT99 294 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 FIGNL1Q6PIW4 674 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 LRRTM4Q86VH4 590 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PDZD7Q9H5P4 517 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 TAS2R7Q9NYW3 318 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 DISP2A7MBM2 1401 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
NPHP3-ACAD11-201ENST00000471702 PLD4Q96BZ4 506 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms