RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 DCLRE1BQ9H816 532 aa16.96■□□□□ 0.31
MRPL28-208ENST00000469744 NOP53Q9NZM5 478 aaKnown RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 MRPS18BQ9Y676 258 aaKnown RBP16.96■□□□□ 0.31
MRPL28-208ENST00000469744 BTN3A3O00478 584 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 VPS26AO75436 327 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 FTH1P02794 183 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 ITGB2P05107 769 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 FGF5P12034 268 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 F8A1P23610 371 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 PPARGP37231 505 aaPredicted RBP16.95■□□□□ 0.3
MRPL28-208ENST00000469744 CPA2P48052 419 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 CCNG1P51959 295 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 ABHD18Q0P651 414 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 GPR19Q15760 415 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 LSM12Q3MHD2 195 aaKnown RBP16.95■□□□□ 0.3
MRPL28-208ENST00000469744 SYTL3Q4VX76 610 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 ZNF678Q5SXM1 525 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 PWWP2BQ6NUJ5 590 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 C6orf15Q6UXA7 325 aaPredicted RBP16.95■□□□□ 0.3
MRPL28-208ENST00000469744 SCUBE1Q8IWY4 988 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 ESX1Q8N693 406 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 OR5AR1Q8NGP9 310 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 STAG3L4Q8TBR4 150 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 LKAAEAR1Q8TD35 194 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 PTERQ96BW5 349 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 MED8Q96G25 268 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 ATOH8Q96SQ7 321 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 TRIT1Q9H3H1 467 aaKnown RBP16.95■□□□□ 0.3
MRPL28-208ENST00000469744 GSTO2Q9H4Y5 243 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 FGF21Q9NSA1 209 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 SOHLH2Q9NX45 425 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 POMT2Q9UKY4 750 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 RARRES3Q9UL19 164 aa16.95■□□□□ 0.3
MRPL28-208ENST00000469744 BTN3A1O00481 513 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 LIN7AO14910 233 aaPredicted RBP16.94■□□□□ 0.3
MRPL28-208ENST00000469744 ZBTB14O43829 449 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 KERAO60938 352 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 CIB2O75838 187 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 ESR1P03372 595 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 OR56A5P0C7T3 313 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 COX4I1P13073 169 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 FMO4P31512 558 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 CCR10P46092 362 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 HERVK_113P63132 956 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 HSD11B2P80365 405 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 MXRA7P84157 204 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 TRMT5Q32P41 509 aaKnown RBP16.94■□□□□ 0.3
MRPL28-208ENST00000469744 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.94■□□□□ 0.3
MRPL28-208ENST00000469744 ATP1A1-AS1Q5TC04 95 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 C6orf163Q5TEZ5 329 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 LYPLAL1Q5VWZ2 237 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 ICE2Q659A1 982 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 UGT3A1Q6NUS8 523 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 CEP70Q8NHQ1 597 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 SLC45A3Q96JT2 553 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 BIRC8Q96P09 236 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 ERVK-6Q9BXR3 956 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 KLHL25Q9H0H3 589 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 MVB12BQ9H7P6 319 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 PDE7BQ9NP56 450 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 CROTQ9UKG9 612 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 MED16Q9Y2X0 877 aa16.94■□□□□ 0.3
MRPL28-208ENST00000469744 SLC9B1P1A6NJY1 282 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 SYCE1LA8MT33 242 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 ZNF891A8MT65 544 aaPredicted RBP16.93■□□□□ 0.3
MRPL28-208ENST00000469744 IQCF5A8MTL0 148 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 E9PBE3 544 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 SDHDO14521 159 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 KLHL41O60662 606 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 SNRNP200O75643 2136 aaKnown RBP16.93■□□□□ 0.3
MRPL28-208ENST00000469744 ZBTB11O95625 1053 aaPredicted RBP16.93■□□□□ 0.3
MRPL28-208ENST00000469744 NTRK1P04629 796 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 FGF4P08620 206 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 GSTM1P09488 218 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 CDH3P22223 829 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 RPS3P23396 243 aaKnown RBP eCLIP16.93■□□□□ 0.32e-8■■■■□ 22.3
MRPL28-208ENST00000469744 DLSTP36957 453 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 GSTM4Q03013 218 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 MAP7Q14244 749 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 ZRSR2Q15696 482 aaKnown RBP16.93■□□□□ 0.3
MRPL28-208ENST00000469744 UNC50Q53HI1 259 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 CUZD1Q86UP6 607 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 KMT5CQ86Y97 462 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 D2HGDHQ8N465 521 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 RP9Q8TA86 221 aaKnown RBP16.93■□□□□ 0.3
MRPL28-208ENST00000469744 STARD8Q92502 1023 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 KCNJ9Q92806 393 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 TTC1Q99614 292 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 NUF2Q9BZD4 464 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 UNKQ9C0B0 810 aaKnown RBP16.93■□□□□ 0.3
MRPL28-208ENST00000469744 MEAF6Q9HAF1 191 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 PLAGL1Q9UM63 463 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 ICKQ9UPZ9 632 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 ASF1AQ9Y294 204 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 SLC5A10A0PJK1 596 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 QSOX1O00391 747 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 PVRP15151 417 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 PIK3R1P27986 724 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 ACADLP28330 430 aa16.93■□□□□ 0.3
MRPL28-208ENST00000469744 CCR7P32248 378 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms