RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 PIK3R3Q92569 461 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 UHRF2Q96PU4 802 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 EPYCQ99645 322 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 ATG101Q9BSB4 218 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 THAP2Q9H0W7 228 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 RAVER2Q9HCJ3 691 aaKnown RBP4.54□□□□□ -1.68
LSM5-209ENST00000468872 NOCTQ9UK39 431 aaKnown RBP4.54□□□□□ -1.68
LSM5-209ENST00000468872 FBXL5Q9UKA1 691 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 PA2G4Q9UQ80 394 aaKnown RBP4.54□□□□□ -1.68
LSM5-209ENST00000468872 RUVBL2Q9Y230 463 aaKnown RBP4.54□□□□□ -1.68
LSM5-209ENST00000468872 SNX5Q9Y5X3 404 aa4.54□□□□□ -1.68
LSM5-209ENST00000468872 ACEP12821 1306 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 ILVBLA1L0T0 632 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 SMIM30A4D0T7 59 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 GLRA3O75311 464 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 CLPTM1O96005 669 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 EDN1P05305 212 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 UROSP10746 265 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 PIK3R1P27986 724 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 SSTR1P30872 391 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 HNF4AP41235 474 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 STX1BP61266 288 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 OPCMLQ14982 345 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 SLC39A12Q504Y0 691 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.53□□□□□ -1.68
LSM5-209ENST00000468872 TTC27Q6P3X3 843 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 TMEM270Q6UE05 265 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 SH2D5Q6ZV89 423 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 KCTD9Q7L273 389 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 TRMT1LQ7Z2T5 733 aaKnown RBP4.53□□□□□ -1.68
LSM5-209ENST00000468872 GPR141Q7Z602 305 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 ANKRD46Q86W74 232 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 CROCCP3Q8IVE0 287 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 SIAH3Q8IW03 269 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 AQP12AQ8IXF9 295 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 TRIM58Q8NG06 486 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 OR2T11Q8NH01 316 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 SLC52A3Q9NQ40 469 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 TMEM161AQ9NX61 479 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 GMEB2Q9UKD1 530 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 GRID1Q9ULK0 1009 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 LRP5O75197 1615 aa4.53□□□□□ -1.68
LSM5-209ENST00000468872 A0A0B4J203 849 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 A0A1W2PRV1 198 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 TRIM64A6NGJ6 449 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 TRIM64BA6NI03 449 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 PMS2P5A8MQ11 134 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 H0YIG0 161 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 TTI1O43156 1089 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 KINO60870 393 aaKnown RBP4.52□□□□□ -1.69
LSM5-209ENST00000468872 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 ATP1B1P05026 303 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 CD48P09326 243 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 SP9P0CG40 484 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 FAM157CP0CG43 387 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 C8orf89P0DMQ9 161 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 SFTPDP35247 375 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 IER3P46695 156 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 GLIPR1P48060 266 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 RBM39Q14498 530 aaKnown RBP4.52□□□□□ -1.69
LSM5-209ENST00000468872 ZNF789Q5FWF6 425 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 LCN1P1Q5VSP4 162 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 ARHGEF16Q5VV41 709 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 FUT10Q6P4F1 479 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 TMEM207Q6UWW9 146 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 G2E3Q7L622 706 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 CPEB2Q7Z5Q1 589 aaKnown RBP4.52□□□□□ -1.69
LSM5-209ENST00000468872 CCDC83Q8IWF9 413 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 RCOR2Q8IZ40 523 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 KIAA0895Q8NCT3 520 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 OR7A2PQ8NGA2 310 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 KRT35Q92764 455 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 RBM41Q96IZ5 413 aaKnown RBP4.52□□□□□ -1.69
LSM5-209ENST00000468872 CABS1Q96KC9 395 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 PI4K2AQ9BTU6 479 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 MRPL9Q9BYD2 267 aaKnown RBP4.52□□□□□ -1.69
LSM5-209ENST00000468872 SLC5A7Q9GZV3 580 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 MAN1B1Q9UKM7 699 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 PCDHGA1Q9Y5H4 931 aa4.52□□□□□ -1.69
LSM5-209ENST00000468872 IL16Q14005 1332 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 STK36Q9NRP7 1315 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 TRAV18A0A075B6X5 111 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 A0A0A6YYC8 382 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 A0A0G2JLW4 131 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 SNURFLB1AK76 121 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 I3L1I5 382 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 TRMUO75648 421 aaKnown RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 GLCEO94923 617 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 CGAP01215 116 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 CYP2A7P20853 494 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 MAGEA11P43364 429 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 KHKP50053 298 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 DNA2P51530 1060 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 NME5P56597 212 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 GTDC1Q4AE62 458 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 FAM53AQ6NSI3 398 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 FBXL22Q6P050 247 aa4.51□□□□□ -1.69
LSM5-209ENST00000468872 CCDC60Q8IWA6 550 aaPredicted RBP4.51□□□□□ -1.69
LSM5-209ENST00000468872 MARVELD2Q8N4S9 558 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms