RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 FRG1Q14331 258 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 NCF4Q15080 339 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 PTCHD3Q3KNS1 767 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 CYHR1Q6ZMK1 362 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 MCATQ8IVS2 390 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ENDOVQ8N8Q3 282 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 OR2L3Q8NG85 312 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 RAB3IL1Q8TBN0 382 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ASB11Q8WXH4 323 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 THAP4Q8WY91 577 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 SMPDL3AQ92484 453 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 PKP4Q99569 1192 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 TRMT6Q9UJA5 497 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ZFP69BQ9UJL9 534 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 MTO1Q9Y2Z2 717 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 BAHCC1Q9P281 2608 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 C9J4A7 227 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ATP6V1G2O95670 118 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 CTSBP07858 339 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 PSMB5P28074 263 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 GABRB3P28472 473 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 RASSF2P50749 326 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 NFATC3Q12968 1075 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 FASTKQ14296 549 aaKnown RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 TEDDM1Q5T9Z0 273 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 CPNE9Q8IYJ1 553 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 DLG3Q92796 817 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF285Q96NJ3 590 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 GBP5Q96PP8 586 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 NDC1Q9BTX1 674 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 IRAK4Q9NWZ3 460 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 TAS2R13Q9NYV9 303 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 TXNDC16Q9P2K2 825 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 TCFL5Q9UL49 500 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 CORO1CQ9ULV4 474 aaPredicted RBP13.86□□□□□ -0.19
COL27A1-203ENST00000468565 SNX7Q9UNH6 387 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 MAN2B2Q9Y2E5 1009 aa13.86□□□□□ -0.19
COL27A1-203ENST00000468565 BIRC5O15392 142 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 ZBTB14O43829 449 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 HNRNPCL1O60812 293 aaKnown RBP13.85□□□□□ -0.19
COL27A1-203ENST00000468565 AHSGP02765 367 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 PLA2G2AP14555 144 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 CMPK1P30085 196 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 ARFIP2P53365 341 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 PNLIPRP1P54315 467 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 ARSFP54793 590 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 TIAL1Q01085 375 aaKnown RBP eCLIP13.85□□□□□ -0.19
COL27A1-203ENST00000468565 IL10RAQ13651 578 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 TCTE1Q5JU00 501 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 YOD1Q5VVQ6 348 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-203ENST00000468565 APLFQ8IW19 511 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-203ENST00000468565 ARMC2Q8NEN0 867 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 RFWD2Q8NHY2 731 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 ADAMTS17Q8TE56 1095 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 NDNQ99608 321 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 MIPEPQ99797 713 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 SAR1AQ9NR31 198 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 ANKMY1Q9P2S6 941 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 DCTN4Q9UJW0 460 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 PADI2Q9Y2J8 665 aa13.85□□□□□ -0.19
COL27A1-203ENST00000468565 HMX2A2RU54 273 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 SRPX2O60687 465 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 CD63P08962 238 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 RGS4P49798 205 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 DCDP81605 110 aaKnown RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 RNF44Q7L0R7 432 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 NUDCD3Q8IVD9 361 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 KIF2BQ8N4N8 673 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 C9orf43Q8TAL5 461 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 TUBB6Q9BUF5 446 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 LRMDAQ9H2I8 198 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 BAIAP2L1Q9UHR4 511 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 A0A0G2JND7 137 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 CTSVO60911 334 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 GLRA3O75311 464 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 CCNDBP1O95273 360 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 SLC16A8O95907 504 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 GRM7Q14831 915 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 RBM20Q5T481 1227 aaKnown RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 UBE2R2Q712K3 238 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 ZNF480Q8WV37 535 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 C7orf26Q96N11 449 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 CPNE1Q99829 537 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 ZFATQ9P243 1243 aa13.84□□□□□ -0.19
COL27A1-203ENST00000468565 DHCR7Q9UBM7 475 aaKnown RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 HEMK1Q9Y5R4 338 aaPredicted RBP13.84□□□□□ -0.19
COL27A1-203ENST00000468565 OR2A25A4D2G3 310 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 FITM1A5D6W6 292 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 E7ENX8 843 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 C8GP07360 202 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 BPGMP07738 259 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 KRT16P08779 473 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 GP5P40197 560 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 TAP2Q03519 686 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 SP140Q13342 867 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 CHI3L2Q15782 390 aa13.83□□□□□ -0.2
COL27A1-203ENST00000468565 GRTP1Q5TC63 336 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms