RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ALDH6A1Q02252 535 aaKnown RBP12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SNX1Q13596 522 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 OR1C1Q15619 314 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 MEP1AQ16819 746 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 MINDY4Q4G0A6 757 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 RNF187Q5TA31 235 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-207ENST00000468385 MFSD4BQ5TF39 518 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SPINK14Q6IE38 97 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 MRNIPQ6NTE8 343 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 VN1R4Q7Z5H5 301 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 ADCK2Q7Z695 626 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 KIAA1328Q86T90 577 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SIAH3Q8IW03 269 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 ACBD4Q8NC06 268 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 OR51Q1Q8NH59 317 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 KIFC1Q9BW19 673 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 KCNK13Q9HB14 408 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 KLHL1Q9NR64 748 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 FAM114A2Q9NRY5 505 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 NPIPA1Q9UND3 350 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 CRYL1Q9Y2S2 319 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 PCNX1Q96RV3 2341 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 TACC2O95359 2948 aa12.34□□□□□ -0.43
PTPN7-207ENST00000468385 SCN2AQ99250 2005 aa12.33□□□□□ -0.43
PTPN7-207ENST00000468385 ZNF839A8K0R7 811 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 H7BY64 318 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 ZNHIT1O43257 154 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 MLYCDO95822 493 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 CAPN3P20807 821 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 MGAT1P26572 445 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 EEF1DP29692 281 aaKnown RBP12.33□□□□□ -0.44
PTPN7-207ENST00000468385 BCL6P41182 706 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 XCR1P46094 333 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 NPY2RP49146 381 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 PTK6Q13882 451 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SEL1L2Q5TEA6 688 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SPNS3Q6ZMD2 512 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SDCCAG8Q86SQ7 713 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SLC13A5Q86YT5 568 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-207ENST00000468385 CEP97Q8IW35 865 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 CHERPQ8IWX8 916 aaKnown RBP12.33□□□□□ -0.44
PTPN7-207ENST00000468385 REXO1L1PQ8IX06 675 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 FBXO15Q8NCQ5 510 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-207ENST00000468385 M1APQ8TC57 530 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 PRAP1Q96NZ9 151 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 TCF12Q99081 682 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SLC30A3Q99726 388 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 UTP23Q9BRU9 249 aaKnown RBP12.33□□□□□ -0.44
PTPN7-207ENST00000468385 ENKD1Q9H0I2 346 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 GPAMQ9HCL2 828 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 MMP25Q9NPA2 562 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 ABCF3Q9NUQ8 709 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 BFARQ9NZS9 450 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 HCN3Q9P1Z3 774 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 CAPN6Q9Y6Q1 641 aa12.33□□□□□ -0.44
PTPN7-207ENST00000468385 SGK494L7N484 410 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 ASNA1O43681 348 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 NEURL1O76050 574 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 CD46P15529 392 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 IL1RNP18510 177 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 OGNP20774 298 aaKnown RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 AGTR2P50052 363 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 CLCN7P51798 805 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 HSF1Q00613 529 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 TLE4Q04727 773 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 KIF5AQ12840 1032 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 EXT1Q16394 746 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 SKOR2Q2VWA4 1001 aaPredicted RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 TMEM214Q6NUQ4 689 aaKnown RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 CENPUQ71F23 418 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 GALNTL5Q7Z4T8 443 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 PCGF5Q86SE9 256 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 CDH24Q86UP0 819 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 TMEM178AQ8NBL3 297 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 GIMAP7Q8NHV1 300 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 AGAP11Q8TF27 550 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 PHF10Q8WUB8 498 aaKnown RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 EBNA1BP2Q99848 306 aaKnown RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 TREX2Q9BQ50 279 aaPredicted RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 MACROD1Q9BQ69 325 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 TRIM51Q9BSJ1 452 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 SOX13Q9UN79 622 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
PTPN7-207ENST00000468385 MED16Q9Y2X0 877 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 CCDC168Q8NDH2 2452 aa12.32□□□□□ -0.44
PTPN7-207ENST00000468385 KCNE1BA0A087WTH5 132 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 GABRR3A8MPY1 467 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 E5RI56 91 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 AP3B1O00203 1094 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 ADAM10O14672 748 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 PFDN6O15212 129 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 KIF5CO60282 957 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 SYF2O95926 243 aaKnown RBP12.31□□□□□ -0.44
PTPN7-207ENST00000468385 SP1P08047 785 aa12.31□□□□□ -0.44
PTPN7-207ENST00000468385 IMPA1P29218 277 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms