RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ATL1Q8WXF7 558 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 RERGQ96A58 199 aaPredicted RBP13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 FBXL8Q96CD0 374 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 GPR22Q99680 433 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 EGFL8Q99944 293 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 SLC26A1Q9H2B4 701 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 P4HTMQ9NXG6 502 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 NXT1Q9UKK6 140 aaKnown RBP13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 NUP210LQ5VU65 1888 aa13.4□□□□□ -0.26
CCHCR1-211ENST00000467553 A0A1B0GX78 115 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 FITM1A5D6W6 292 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 ANXA5P08758 320 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 NPPBP16860 134 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 ITGAXP20702 1163 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 MMP11P24347 488 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 CCND1P24385 295 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 HRH2P25021 359 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 PHBP35232 272 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 OR1D4P47884 311 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 TSNQ15631 228 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 UAP1Q16222 522 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 ZXDCQ2QGD7 858 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 C4orf17Q53FE4 359 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 LCTLQ6UWM7 567 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 SBSNQ6UWP8 590 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 RAPH1Q70E73 1250 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 FRA10AC1Q70Z53 315 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 OVCH1Q7RTY7 1134 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 DTWD1Q8N5C7 304 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 OR2A5Q96R48 311 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 FMO2Q99518 471 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 SGPP1Q9BX95 441 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 FAM129AQ9BZQ8 928 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 TSPYL1Q9H0U9 437 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 ZNF552Q9H707 407 aaPredicted RBP13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 NOVA2Q9UNW9 492 aaKnown RBP13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 SH2B3Q9UQQ2 575 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 MAU2Q9Y6X3 613 aa13.39□□□□□ -0.27
CCHCR1-211ENST00000467553 FEZF1A0PJY2 475 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 TCP11X1B4DZS4 312 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 MED26O95402 600 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 ACSL3O95573 720 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 STATHP02808 62 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 CDH1P12830 882 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 EZRP15311 586 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 FOXL2P58012 376 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 RAB10P61026 200 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 CSNK1G2P78368 415 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 NAB1Q13506 487 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 CSHL1Q14406 222 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 SLMAPQ14BN4 828 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 PPP1R3AQ16821 1122 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 HKDC1Q2TB90 917 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 UBAP2Q5T6F2 1119 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 PPP1R32Q7Z5V6 425 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 CSNK1A1LQ8N752 337 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 OR56A3Q8NH54 315 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 CYTH2Q99418 400 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 HAUS8Q9BT25 410 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 YIPF2Q9BWQ6 316 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 MFRPQ9BY79 579 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 DERL2Q9GZP9 239 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 SYNPO2LQ9H987 977 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 ZNF304Q9HCX3 659 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 SLC22A11Q9NSA0 550 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 PLEKHB1Q9UF11 243 aaPredicted RBP13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 RUVBL1Q9Y265 456 aaKnown RBP13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 OARD1Q9Y530 152 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 TEX15Q9BXT5 2789 aa13.38□□□□□ -0.27
CCHCR1-211ENST00000467553 HIVEP3Q5T1R4 2406 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 NCF1BA6NI72 391 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 NCF1CA8MVU1 366 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 TXNDC9O14530 226 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 LCMT2O60294 686 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 CNOT3O75175 753 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 UMODP07911 640 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 NCF1P14598 390 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 GRK3P35626 688 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 GMPRP36959 345 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 RELAQ04206 551 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 PRTGQ2VWP7 1150 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 PLEKHN1Q494U1 663 aaPredicted RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 MROH9Q5TGP6 573 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 IRAK1BP1Q5VVH5 260 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 Q6ZS92 163 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 CMC1Q7Z7K0 106 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 ADAMTSL2Q86TH1 951 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 THOC6Q86W42 341 aaKnown RBP13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 GPSM1Q86YR5 675 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 IFT20Q8IY31 132 aa13.37□□□□□ -0.27
CCHCR1-211ENST00000467553 UHMK1Q8TAS1 419 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms