RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TOXO94900 526 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 MLYCDO95822 493 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 SLC16A8O95907 504 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 CD46P15529 392 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 TRHRP34981 398 aaPredicted RBP11.47□□□□□ -0.57
UBR4-211ENST00000467272 HSD17B2P37059 387 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 FDFT1P37268 417 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 BCL6P41182 706 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 SKIV2L2P42285 1042 aaKnown RBP11.47□□□□□ -0.57
UBR4-211ENST00000467272 PNLIPRP1P54315 467 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 PRAMEP78395 509 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 ABATP80404 500 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 EXT1Q16394 746 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 PCID2Q5JVF3 399 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 SLC25A25Q6KCM7 469 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 GALNTL5Q7Z4T8 443 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.47□□□□□ -0.57
UBR4-211ENST00000467272 DMRTC2Q8IXT2 367 aaPredicted RBP11.47□□□□□ -0.57
UBR4-211ENST00000467272 TMEM178AQ8NBL3 297 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 PLPP5Q8NEB5 264 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 OR51Q1Q8NH59 317 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 LILRB4Q8NHJ6 448 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 METTL21AQ8WXB1 218 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 YIPF2Q9BWQ6 316 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 TAC3Q9UHF0 121 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 PCYOX1Q9UHG3 505 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 MED16Q9Y2X0 877 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 HEATR5BQ9P2D3 2071 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 SCN2AQ99250 2005 aa11.47□□□□□ -0.57
UBR4-211ENST00000467272 GABRR3A8MPY1 467 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 FAM227AF5H4B4 570 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 GFYI3L273 518 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 LIASO43766 372 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 MSX1P28360 303 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 PTGER1P34995 402 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 RPA3P35244 121 aaPredicted RBP11.46□□□□□ -0.57
UBR4-211ENST00000467272 XCR1P46094 333 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 AVPR1BP47901 424 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 AGTR2P50052 363 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 ST13P50502 369 aaKnown RBP11.46□□□□□ -0.57
UBR4-211ENST00000467272 CLCN7P51798 805 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 KCNJ11Q14654 390 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 USP10Q14694 798 aaKnown RBP11.46□□□□□ -0.57
UBR4-211ENST00000467272 ACSBG2Q5FVE4 666 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 C3P1Q6ZMU1 363 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 PLD3Q8IV08 490 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 AFAP1L2Q8N4X5 818 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 FAM57AQ8TBR7 257 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 ASB11Q8WXH4 323 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 ATG4AQ8WYN0 398 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 RERGQ96A58 199 aaPredicted RBP11.46□□□□□ -0.57
UBR4-211ENST00000467272 SDCCAG3Q96C92 435 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 CCDC138Q96M89 665 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 FOPNLQ96NB1 174 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 KIFC1Q9BW19 673 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 KCNK13Q9HB14 408 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 DLL4Q9NR61 685 aa11.46□□□□□ -0.57
UBR4-211ENST00000467272 C19orf25Q9UFG5 118 aaPredicted RBP11.46□□□□□ -0.57
UBR4-211ENST00000467272 GOLGA6L9A6NEM1 432 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 MAGEB17A8MXT2 336 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 NIPSNAP2O75323 286 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 SLC25A12O75746 678 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 CCNDBP1O95273 360 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 TSPAN12O95859 305 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 GAS8O95995 478 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 ESR1P03372 595 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 NMBRP28336 390 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 DNAJA1P31689 397 aaKnown RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 CETN2P41208 172 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 ART1P52961 327 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 MPP1Q00013 466 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 NDUFA9Q16795 377 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 SFT2D3Q587I9 215 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 CMPK2Q5EBM0 449 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 EMC4Q5J8M3 183 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 PPP1R21Q6ZMI0 780 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 CYHR1Q6ZMK1 362 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 PRUNE1Q86TP1 453 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 CPSF7Q8N684 471 aaKnown RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 PPFIBP2Q8ND30 876 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 PPHLN1Q8NEY8 458 aaKnown RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 GIMAP7Q8NHV1 300 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 GSDMBQ8TAX9 411 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 CA5BP1Q8WTZ4 195 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 SKA2Q8WVK7 121 aaPredicted RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 HES6Q96HZ4 224 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 TCF12Q99081 682 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 SLC30A3Q99726 388 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 FOXC2Q99958 501 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 EIF2B3Q9NR50 452 aaKnown RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 FAM114A2Q9NRY5 505 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 UTP6Q9NYH9 597 aaKnown RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 LRFN1Q9P244 771 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 KLHL42Q9P2K6 505 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 KCNN3Q9UGI6 736 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 ANAPC5Q9UJX4 755 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 PPT2Q9UMR5 302 aa11.45□□□□□ -0.58
UBR4-211ENST00000467272 EPN1Q9Y6I3 576 aaPredicted RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 PRRC2AP48634 2157 aaKnown RBP11.45□□□□□ -0.58
UBR4-211ENST00000467272 GTF3C1Q12789 2109 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms