RNA–Protein interactions for RNA: ENST00000467081.1

CCNL1-209, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-209	ENST00000467081	C2orf48	Q96LS8	159 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	FAM218A	Q96MZ4	157 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	EDEM3	Q9BZQ6	932 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	NDE1	Q9NXR1	346 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	IGSF1	Q8N6C5	1336 aa		4.61	□□□□□ -1.67
CCNL1-209	ENST00000467081	ARHGEF37	A1IGU5	675 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	TGDS	O95455	350 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	PENK	P01210	267 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	CAPN2	P17655	700 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	ACHE	P22303	614 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	ELAVL4	P26378	380 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	OR3A2	P47893	321 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	CLDN15	P56746	228 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	UBASH3A	P57075	661 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	KRTAP10-3	P60369	221 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	LY6D	Q14210	128 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	OPCML	Q14982	345 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	TAB1	Q15750	504 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	DCLRE1A	Q6PJP8	1040 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	SUSD1	Q6UWL2	747 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	FCRLA	Q7L513	359 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	CHMP1B	Q7LBR1	199 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	CCDC186	Q7Z3E2	898 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	TLK2	Q86UE8	772 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	SPAG16	Q8N0X2	631 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	FAM89B	Q8N5H3	189 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	AMER3	Q8N944	861 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	GPATCH11	Q8N954	259 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	XXYLT1	Q8NBI6	393 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	SOST	Q9BQB4	213 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	TDRD1	Q9BXT4	1180 aa	Known RBP	4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	HOXD1	Q9GZZ0	328 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	PANK3	Q9H999	370 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	CSAG2	Q9Y5P2	127 aa		4.6	□□□□□ -1.67
CCNL1-209	ENST00000467081	TRAV24	A0A0B4J272	114 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	C2CD4D	B7Z1M9	353 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	SCG2	P13521	617 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	ERCC2	P18074	760 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PTAFR	P25105	342 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PDHA2	P29803	388 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PRKCI	P41743	596 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	NPY4R	P50391	375 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	TFCP2	Q12800	502 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	CST9LP1	Q5W188	147 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	TRAT1	Q6PIZ9	186 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZER1	Q7Z7L7	766 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	IQCA1	Q86XH1	822 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	MFN1	Q8IWA4	741 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081		Q8N377	158 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	METTL4	Q8N3J2	472 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PI4KAP1	Q8N8J0	262 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	OR5T2	Q8NGG2	359 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	TSACC	Q96A04	125 aa	Predicted RBP	4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	SPSB1	Q96BD6	273 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	CNRIP1	Q96F85	164 aa	Predicted RBP	4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	VMP1	Q96GC9	406 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	ATXN7L3B	Q96GX2	97 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	ZNF558	Q96NG5	402 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PFDN4	Q9NQP4	134 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PRDM4	Q9UKN5	801 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	PA2G4	Q9UQ80	394 aa	Known RBP	4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	POMT1	Q9Y6A1	747 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	SELENOK	Q9Y6D0	94 aa		4.59	□□□□□ -1.67
CCNL1-209	ENST00000467081	LOC105371242	A0A075B767	164 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	ASB14	A6NK59	587 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	SLU7	O95391	586 aa	Known RBP	4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	BAG3	O95817	575 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	HSP90AB1	P08238	724 aa	Known RBP	4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	IFNAR1	P17181	557 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	CETN2	P41208	172 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	IRX4	P78413	519 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	RBP5	P82980	135 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	PAX8	Q06710	450 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	COX10	Q12887	443 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	FAM189A2	Q15884	450 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	PPP1R21	Q6ZMI0	780 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	SLC24A5	Q71RS6	500 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	CAMKV	Q8NCB2	501 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	OR2L2	Q8NH16	312 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	RASL10A	Q92737	203 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	LRRC3B	Q96PB8	259 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	KLHL5	Q96PQ7	755 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	CDCA3	Q99618	268 aa	Predicted RBP	4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	OVOL2	Q9BRP0	275 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	XAB2	Q9HCS7	855 aa	Known RBP	4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	CHCHD3	Q9NX63	227 aa	Known RBP	4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	GTF3C4	Q9UKN8	822 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	WIPI2	Q9Y4P8	454 aa		4.58	□□□□□ -1.68
CCNL1-209	ENST00000467081	TRAV34	A0A0B4J273	112 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	CEACAM4	O75871	244 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	FYN	P06241	537 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	THEGL	P0DJG4	465 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	OAS2	P29728	719 aa	Known RBP	4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	GP5	P40197	560 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	CSRP3	P50461	194 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	DCDC1	P59894	354 aa		4.57	□□□□□ -1.68
CCNL1-209	ENST00000467081	ILF2	Q12905	390 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms