RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 KCNJ13O60928 360 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 VPS4BO75351 444 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 GUCA1CO95843 209 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 C1QBP02746 253 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 INHAP05111 366 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 GGT1P19440 569 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 MSH3P20585 1137 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 DCTP40126 519 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ZXDBP98169 803 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 TRAF4Q9BUZ4 470 aaPredicted RBP17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 BOCQ9BWV1 1114 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 SLC22A4Q9H015 551 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ABCG8Q9H221 673 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 ATP6V1HQ9UI12 483 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 PCTPQ9UKL6 214 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 GPR45Q9Y5Y3 372 aa17.49■□□□□ 0.39
SNAPC3-205ENST00000467062 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 DNTTP04053 509 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 CYBBP04839 570 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 ALPPP05187 535 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 PRKACGP22612 351 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 CSTF2P33240 577 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 PIK3CGP48736 1102 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 ADGRF1Q5T601 910 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 CAPN13Q6MZZ7 669 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 PLEKHM3Q6ZWE6 761 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 CDH24Q86UP0 819 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 GPSM1Q86YR5 675 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 SLC47A1Q96FL8 570 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 TMEFF2Q9UIK5 374 aaPredicted RBP17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 COMMD10Q9Y6G5 202 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 TBL1XO60907 577 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 VPS26AO75436 327 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 HLA-DMAP28067 261 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 IL2P60568 153 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 LAPTM5Q13571 262 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 FAM151BQ6UXP7 276 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.48■□□□□ 0.399e-30■■■■■ 113.3
SNAPC3-205ENST00000467062 SPATA19Q7Z5L4 167 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 YIPF7Q8N8F6 280 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 ANKRD53Q8N9V6 530 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 PRRG3Q9BZD7 231 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 INTS7Q9NVH2 962 aaKnown RBP17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 COQ3Q9NZJ6 369 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 ZMYM5Q9UJ78 669 aa17.48■□□□□ 0.39
SNAPC3-205ENST00000467062 PCP4L1A6NKN8 68 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 H7C4K7 107 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 RPS17P08708 135 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 CNPP09543 421 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 EFNA1P20827 205 aaPredicted RBP17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 MYL9P24844 172 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 HTR6P50406 440 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 MFSD13AQ14CX5 517 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 METTL2BQ6P1Q9 378 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 NPAS4Q8IUM7 802 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 FNDC5Q8NAU1 212 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 UBASH3BQ8TF42 649 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 TTLL2Q9BWV7 592 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 MMP28Q9H239 520 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 ACTR8Q9H981 624 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 POPDC3Q9HBV1 291 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 DYRK4Q9NR20 520 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 LOC100506127A0A0U1RQW1 187 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 A0A1B0GVM2 712 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 I3L521 148 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 TRIM3O75382 744 aaPredicted RBP17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 IGFBP5P24593 272 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 GDF5P43026 501 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 ERVPABLB-1P60509 514 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 TIGD6Q17RP2 521 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 FBXO30Q8TB52 745 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 ISG20Q96AZ6 181 aaKnown RBP17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 FRMD6Q96NE9 622 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 FAM83DQ9H4H8 585 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 GORASP2Q9H8Y8 452 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 TRPM5Q9NZQ8 1165 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 INVSQ9Y283 1065 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 GMPPBQ9Y5P6 360 aa17.47■□□□□ 0.39
SNAPC3-205ENST00000467062 E2F3O00716 465 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 TSPAN4O14817 238 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 GSTA4O15217 222 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 AKR7A2O43488 359 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 SMAD6O43541 496 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 CCNYL3P0C7X3 344 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 ADORA3P0DMS8 318 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 LAIR1Q6GTX8 287 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 SLC46A3Q7Z3Q1 461 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 VWA5B2Q8N398 1253 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 DNAJA4Q8WW22 397 aaPredicted RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 ITCHQ96J02 903 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 RHNO1Q9BSD3 238 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 GTPBP2Q9BX10 602 aaKnown RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 GPR63Q9BZJ6 419 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 EVLQ9UI08 416 aaPredicted RBP17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 FBXO10Q9UK96 956 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 AUP1Q9Y679 476 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 BNIP3LO60238 219 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 SLC22A3O75751 556 aa17.46■□□□□ 0.39
SNAPC3-205ENST00000467062 IFNA16P05015 189 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms