RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 LSMEM2Q8N112 164 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ZNF740Q8NDX6 193 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 TRPV3Q8NET8 790 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 PPP1R14CQ8TAE6 165 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 TM4SF19Q96DZ7 209 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 MOCOSQ96EN8 888 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ZPBPQ9BS86 351 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 DDA1Q9BW61 102 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 MID1IP1Q9NPA3 183 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 OCIAD1Q9NX40 245 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 ZFP69BQ9UJL9 534 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 HAO1Q9UJM8 370 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 PPT2Q9UMR5 302 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 WASF3Q9UPY6 502 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 PCDHGA3Q9Y5H0 932 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 CACNA1AO00555 2505 aa14.53□□□□□ -0.08
NPHP4-205ENST00000466897 A0A0J9YVX5 310 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 A0A1B0GTL3 188 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 FEZF1A0PJY2 475 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 FITM1A5D6W6 292 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 PPP6CO00743 305 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 HCRTR1O43613 425 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 OR1F1O43749 312 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 LCMT2O60294 686 aaKnown RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 FGF4P08620 206 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 NEFHP12036 1026 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 HGFP14210 728 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 BGNP21810 368 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 PIK3CBP42338 1070 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 ABCE1P61221 599 aaKnown RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 MEF2AQ02078 507 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 STX3Q13277 289 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 PWP1Q13610 501 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 YOD1Q5VVQ6 348 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 CES4AQ5XG92 561 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 FRMPD2BQ6IN97 320 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 RGS9BPQ6ZS82 235 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 RNF165Q6ZSG1 346 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 VN1R4Q7Z5H5 301 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF655Q8N720 491 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 ANKRD53Q8N9V6 530 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 OR7G3Q8NG95 312 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 WDR20Q8TBZ3 569 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 NT5CQ8TCD5 201 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 RERGQ96A58 199 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 CDK15Q96Q40 435 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 TEFMQ96QE5 360 aaKnown RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 OR6C1Q96RD1 312 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 NRSN2Q9GZP1 204 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 MANSC1Q9H8J5 431 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 ACSS2Q9NR19 701 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 PSD3Q9NYI0 1048 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 SERTAD3Q9UJW9 196 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 RARRES3Q9UL19 164 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 ZNF490Q9ULM2 529 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.52□□□□□ -0.09
NPHP4-205ENST00000466897 RNF11Q9Y3C5 154 aa14.52□□□□□ -0.09
NPHP4-205ENST00000466897 A0A1W2PNU3 283 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 TMEM150CB9EJG8 249 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 H0YGG7 62 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 POLR1CO15160 346 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 SNNO75324 88 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CLEC3AO75596 197 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 OR4F21O95013 312 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 JMJD7P0C870 316 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CCL4P13236 92 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 TSPAN8P19075 237 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 ARRB2P32121 409 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 ARL1P40616 181 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 GCGRP47871 477 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 ITGA1P56199 1179 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 ARF3P61204 181 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CYP4F3Q08477 520 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 BST1Q10588 318 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CAMK2BQ13554 666 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 GPR19Q15760 415 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CPSF6Q16630 551 aaKnown RBP eCLIP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 PRTGQ2VWP7 1150 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 DEFB110Q30KQ9 67 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 TLDC1Q6P9B6 456 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CEACAM20Q6UY09 585 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 ASPGQ86U10 573 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CUZD1Q86UP6 607 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 PPP1R3BQ86XI6 285 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 MYLK4Q86YV6 388 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CAMKVQ8NCB2 501 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 FAM76AQ8TAV0 307 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 DYDC1Q8WWB3 177 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 CKAP2Q8WWK9 683 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 N4BP2L2Q92802 583 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 PRR11Q96HE9 360 aaPredicted RBP14.51□□□□□ -0.09
NPHP4-205ENST00000466897 TAAR9Q96RI9 348 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 NLNQ9BYT8 704 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 ASPSCR1Q9BZE9 553 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 SYNPO2LQ9H987 977 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 POLR1BQ9H9Y6 1135 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 THAP1Q9NVV9 213 aa14.51□□□□□ -0.09
NPHP4-205ENST00000466897 FAM53CQ9NYF3 392 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms