RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FCRL4Q96PJ5 515 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 ZNF317Q96PQ6 595 aaPredicted RBP10.67□□□□□ -0.7
VCP-204ENST00000466100 ZFYVE21Q9BQ24 234 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 RTKNQ9BST9 563 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 RHBGQ9H310 441 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 FRYQ5TBA9 3013 aa10.67□□□□□ -0.7
VCP-204ENST00000466100 A8MU76 341 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 MANBAO00462 879 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 FFAR3O14843 346 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 HGSO14964 777 aaPredicted RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 GPR42O15529 346 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 JUNP05412 331 aaKnown RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 CTSBP07858 339 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 UROSP10746 265 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 CXCR2P25025 360 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 AHRP35869 848 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 MLLT3P42568 568 aaPredicted RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 SEPHS1P49903 392 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 INHBCP55103 352 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 CYP4F3Q08477 520 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 KCNAB1Q14722 419 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 ISXQ2M1V0 245 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 DEFB110Q30KQ9 67 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 CCDC157Q569K6 752 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 HES3Q5TGS1 186 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 FRG2Q64ET8 278 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 FRMPD2BQ6IN97 320 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 MED27Q6P2C8 311 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 FAM47EQ6ZV65 393 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 MYLK4Q86YV6 388 aaPredicted RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 CACTIN-AS1Q8N1I8 211 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 KRT78Q8N1N4 520 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 METTL6Q8TCB7 284 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 CREB3L4Q8TEY5 395 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 ZNF473Q8WTR7 871 aaKnown RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 UBE2E3Q969T4 207 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 TM4SF19Q96DZ7 209 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 THAP11Q96EK4 314 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 SEC16BQ96JE7 1060 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 TMEM74Q96NL1 305 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 FRG2BQ96QU4 278 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 AICDAQ9GZX7 198 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 ILKAPQ9H0C8 392 aaPredicted RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 TUBB1Q9H4B7 451 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 PDE7BQ9NP56 450 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 FARSBQ9NSD9 589 aaKnown RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 PNPOQ9NVS9 261 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 DLL3Q9NYJ7 618 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 PPT2Q9UMR5 302 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 APOBEC2Q9Y235 224 aaKnown RBP10.66□□□□□ -0.7
VCP-204ENST00000466100 TRAF6Q9Y4K3 522 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 TIMM22Q9Y584 194 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 PCDHGA11Q9Y5H2 935 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 DNAJC15Q9Y5T4 150 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 AP1M2Q9Y6Q5 423 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 SCN3AQ9NY46 2000 aa10.66□□□□□ -0.7
VCP-204ENST00000466100 LOC105369274A0A096LPK9 316 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 LOC102723532A0A0G2JNH3 316 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 A0A0J9YVX5 310 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 SERTM1A2A2V5 107 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 H0YGG7 62 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 ZNF195O14628 629 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 P2RX6O15547 441 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 OR1F1O43749 312 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 HYAL3O43820 417 aaPredicted RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 SHOX2O60902 331 aaPredicted RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 MT-CO3P00414 261 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 FOLR1P15328 257 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 GSTM2P28161 218 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 SERPINB3P29508 390 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 LSP1P33241 339 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 GRK3P35626 688 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 ARL1P40616 181 aaPredicted RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 PIK3CBP42338 1070 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 RPL14P50914 215 aaKnown RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 ARF3P61204 181 aaPredicted RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 HYAL2Q12891 473 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 C10orf62Q5T681 223 aaPredicted RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 PHF19Q5T6S3 580 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 MAVSQ7Z434 540 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 MCATQ8IVS2 390 aaKnown RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 KIRREL3Q8IZU9 778 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 CLYBLQ8N0X4 340 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 OR4N4Q8N0Y3 316 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 RNF175Q8N4F7 328 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 ARHGEF39Q8N4T4 335 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 BMPERQ8N8U9 685 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 TTLQ8NG68 377 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 HUS1BQ8NHY5 278 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 AGR3Q8TD06 166 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 LIN37Q96GY3 246 aaPredicted RBP10.65□□□□□ -0.7
VCP-204ENST00000466100 DMRT3Q9NQL9 472 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 SOHLH2Q9NX45 425 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 ZFP69BQ9UJL9 534 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 SNX6Q9UNH7 406 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 CCL27Q9Y4X3 112 aa10.65□□□□□ -0.7
VCP-204ENST00000466100 A0A1W2PNU3 283 aaPredicted RBP10.64□□□□□ -0.71
VCP-204ENST00000466100 FOXE1O00358 373 aaPredicted RBP10.64□□□□□ -0.71
VCP-204ENST00000466100 CSO75390 466 aaKnown RBP10.64□□□□□ -0.71
VCP-204ENST00000466100 CLEC3AO75596 197 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms