RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 RAB40ALP0C0E4 278 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 PYGBP11216 843 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TCN2P20062 427 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 SCTRP47872 440 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 VAC14Q08AM6 782 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 PCBP2Q15366 365 aaKnown RBP eCLIP19.38■□□□□ 0.69
SKA3-205ENST00000465471 PDK4Q16654 411 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 PFKFB4Q16877 469 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 COL28A1Q2UY09 1125 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 GARNL3Q5VVW2 1013 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 METTL2BQ6P1Q9 378 aaKnown RBP19.38■□□□□ 0.69
SKA3-205ENST00000465471 C19orf48Q6RUI8 117 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TTLL10Q6ZVT0 673 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 RIBC1Q8N443 379 aaPredicted RBP19.38■□□□□ 0.69
SKA3-205ENST00000465471 RUFY1Q96T51 708 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TMEM109Q9BVC6 243 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 SLC22A11Q9NSA0 550 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TXLNGQ9NUQ3 528 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 LGALS13Q9UHV8 139 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 KCND3Q9UK17 655 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 TMCO1Q9UM00 188 aa19.38■□□□□ 0.69
SKA3-205ENST00000465471 SMIM23A6NLE4 172 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 FOXO6A8MYZ6 492 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 K7EPI3 171 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 CCNT2O60583 730 aaKnown RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 GSTA1P08263 222 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 C1GALT1C1LP0DN25 315 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 GFAPP14136 432 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 VARSP26640 1264 aaKnown RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 DCDP81605 110 aaKnown RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 C1orf189Q5VU69 101 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 AIF1LQ9BQI0 150 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 GPR87Q9BY21 358 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 NLNQ9BYT8 704 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 ROPN1BQ9BZX4 212 aaPredicted RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 ROPN1Q9HAT0 212 aaPredicted RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 RRAGDQ9NQL2 400 aaPredicted RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 GEMIN8Q9NWZ8 242 aaKnown RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 TMEM216Q9P0N5 145 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 CPSF2Q9P2I0 782 aaKnown RBP19.37■□□□□ 0.69
SKA3-205ENST00000465471 OPTCQ9UBM4 332 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 MGAQ8IWI9 3026 aa19.37■□□□□ 0.69
SKA3-205ENST00000465471 STX16-NPEPL1H3BU86 382 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 GOLGA8RI6L899 631 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 STX16O14662 325 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 AGXTP21549 392 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 AHRP35869 848 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 CASP2P42575 452 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 SNRPNP63162 240 aaKnown RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 CXADRP78310 365 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 COL9A2Q14055 689 aaPredicted RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 TBCCQ15814 346 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 MUM1Q2TAK8 710 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 NKAIN1Q4KMZ8 207 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 CRTC2Q53ET0 693 aaPredicted RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 MRPL14Q6P1L8 145 aaKnown RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 ASPGQ86U10 573 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 DTWD1Q8N5C7 304 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 SNX31Q8N9S9 440 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 ANKRD53Q8N9V6 530 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 STARD8Q92502 1023 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 MVB12AQ96EY5 273 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 SCYL1Q96KG9 808 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 PITHD1Q9GZP4 211 aaPredicted RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 NT5DC2Q9H857 520 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 WDR70Q9NW82 654 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 ZFP69BQ9UJL9 534 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 PLAAQ9Y263 795 aa19.36■□□□□ 0.69
SKA3-205ENST00000465471 TNPO3Q9Y5L0 923 aaKnown RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 MRPS18BQ9Y676 258 aaKnown RBP19.36■□□□□ 0.69
SKA3-205ENST00000465471 LRRC14BA6NHZ5 514 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 CLGNO14967 610 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 OR1F1O43749 312 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 RECKO95980 971 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 KRT15P19012 456 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 CD22P20273 847 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 PTPN4P29074 926 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 NFKB2Q00653 900 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 PWP1Q13610 501 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 FAM53BQ14153 422 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 SLBPQ14493 270 aaKnown RBP eCLIP19.35■□□□□ 0.69
SKA3-205ENST00000465471 NCF4Q15080 339 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 TMEM214Q6NUQ4 689 aaKnown RBP19.35■□□□□ 0.69
SKA3-205ENST00000465471 PRMT9Q6P2P2 845 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 COX15Q7KZN9 410 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 TBC1D19Q8N5T2 526 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 PTGR2Q8N8N7 351 aaPredicted RBP19.35■□□□□ 0.69
SKA3-205ENST00000465471 CAMKVQ8NCB2 501 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 PTCD3Q96EY7 689 aaKnown RBP19.35■□□□□ 0.69
SKA3-205ENST00000465471 C17orf62Q9BQA9 187 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 ACTL8Q9H568 366 aa19.35■□□□□ 0.69
SKA3-205ENST00000465471 MRPS2Q9Y399 296 aaKnown RBP19.35■□□□□ 0.69
SKA3-205ENST00000465471 NBEAQ8NFP9 2946 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 ZNF891A8MT65 544 aaPredicted RBP19.34■□□□□ 0.69
SKA3-205ENST00000465471 E2F3O00716 465 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 FOXS1O43638 330 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 CNOT3O75175 753 aaKnown RBP19.34■□□□□ 0.69
SKA3-205ENST00000465471 WFS1O76024 890 aa19.34■□□□□ 0.69
SKA3-205ENST00000465471 SIX3O95343 332 aaPredicted RBP19.34■□□□□ 0.69
SKA3-205ENST00000465471 STATHP02808 62 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms