RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RUBCNLQ9H714 662 aa21.54■■□□□ 1.04
USP42-205ENST00000465073 CCDC177Q9NQR7 707 aaPredicted RBP21.54■■□□□ 1.04
USP42-205ENST00000465073 C19orf25Q9UFG5 118 aaPredicted RBP21.54■■□□□ 1.04
USP42-205ENST00000465073 PRSS44E7EML9 344 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 KIF5CO60282 957 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 UNC5CO95185 931 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 F7P08709 466 aaPredicted RBP21.53■■□□□ 1.04
USP42-205ENST00000465073 ZNF33BQ06732 778 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 ART3Q13508 389 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 PTK6Q13882 451 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 VN1R4Q7Z5H5 301 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 CPNE9Q8IYJ1 553 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 C20orf96Q9NUD7 363 aaPredicted RBP21.53■■□□□ 1.04
USP42-205ENST00000465073 SUCOQ9UBS9 1254 aaKnown RBP21.53■■□□□ 1.04
USP42-205ENST00000465073 SEC14L3Q9UDX4 400 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 FBXO5Q9UKT4 447 aa21.53■■□□□ 1.04
USP42-205ENST00000465073 SEC24DO94855 1032 aaPredicted RBP21.52■■□□□ 1.04
USP42-205ENST00000465073 STATHP02808 62 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 MST1P26927 711 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 SLC1A2P43004 574 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 SNRPNP63162 240 aaKnown RBP21.52■■□□□ 1.04
USP42-205ENST00000465073 MINDY4Q4G0A6 757 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 MFSD4BQ5TF39 518 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 TTC27Q6P3X3 843 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 PIWIL4Q7Z3Z4 852 aaKnown RBP21.52■■□□□ 1.04
USP42-205ENST00000465073 CAMKVQ8NCB2 501 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 OR51Q1Q8NH59 317 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 MAGOHBQ96A72 148 aaKnown RBP21.52■■□□□ 1.04
USP42-205ENST00000465073 SERPINB12Q96P63 405 aa21.52■■□□□ 1.04
USP42-205ENST00000465073 TRGV8A0A0C4DH27 118 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 A8MUI8 341 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 GOLGA8MH3BSY2 632 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 PRF1P14222 555 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 BCL6P41182 706 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 NAA30Q147X3 362 aaPredicted RBP21.52■■□□□ 1.03
USP42-205ENST00000465073 BTBD16Q32M84 506 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 LRRC8EQ6NSJ5 796 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 TMEM214Q6NUQ4 689 aaKnown RBP21.52■■□□□ 1.03
USP42-205ENST00000465073 MTFR2Q6P444 385 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 PRSS41Q7RTY9 318 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 SPNS2Q8IVW8 549 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 ZNF354BQ96LW1 612 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 CCDC138Q96M89 665 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 FAM129AQ9BZQ8 928 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 KLF2Q9Y5W3 355 aaPredicted RBP21.52■■□□□ 1.03
USP42-205ENST00000465073 MAD1L1Q9Y6D9 718 aa21.52■■□□□ 1.03
USP42-205ENST00000465073 MYO7BQ6PIF6 2116 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 IGHV3-20A0A0C4DH32 117 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 HAUS5O94927 633 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 MAGEA3P43357 314 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 XCR1P46094 333 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 AGTR2P50052 363 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 TBPL1P62380 186 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 CSNK1G2P78368 415 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 RBPJQ06330 500 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 UGT3A1Q6NUS8 523 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 H3F3CQ6NXT2 135 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 LANCL3Q6ZV70 420 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 PCGF5Q86SE9 256 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 AMER2Q8N7J2 671 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 ITLN2Q8WWU7 325 aaPredicted RBP21.51■■□□□ 1.03
USP42-205ENST00000465073 TM4SF19Q96DZ7 209 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 FAM167BQ9BTA0 163 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 AARSD1Q9BTE6 412 aaKnown RBP21.51■■□□□ 1.03
USP42-205ENST00000465073 ANKHQ9HCJ1 492 aa21.51■■□□□ 1.03
USP42-205ENST00000465073 IL1RNP18510 177 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 EXT1Q16394 746 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 ZNF766Q5HY98 468 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 ACER2Q5QJU3 275 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 C17orf64Q86WR6 236 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 MACROD1Q9BQ69 325 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 UNKQ9C0B0 810 aaKnown RBP21.5■■□□□ 1.03
USP42-205ENST00000465073 HCN3Q9P1Z3 774 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 TRMT6Q9UJA5 497 aaKnown RBP21.5■■□□□ 1.03
USP42-205ENST00000465073 PCDHGB6Q9Y5F9 930 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 CPAMD8Q8IZJ3 1885 aa21.5■■□□□ 1.03
USP42-205ENST00000465073 SGK494L7N484 410 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 CCL21O00585 134 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 C8GP07360 202 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 CA7P43166 264 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 RGS4P49798 205 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 MPP1Q00013 466 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 ANKRD37Q7Z713 158 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 PALM2Q8IXS6 379 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.49■■□□□ 1.03
USP42-205ENST00000465073 M1APQ8TC57 530 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 MOCOSQ96EN8 888 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 CCDC120Q96HB5 630 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 SIGLEC10Q96LC7 697 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 KCNK13Q9HB14 408 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 PARVBQ9HBI1 364 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 PDE10AQ9Y233 779 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 NEU2Q9Y3R4 380 aa21.49■■□□□ 1.03
USP42-205ENST00000465073 IL10P22301 178 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 CCND1P24385 295 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 GRK3P35626 688 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 COILP38432 576 aaPredicted RBP21.48■■□□□ 1.03
USP42-205ENST00000465073 CASP6P55212 293 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 HSP90AA5PQ58FG0 334 aa21.48■■□□□ 1.03
USP42-205ENST00000465073 AGTRAPQ6RW13 159 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms