RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SLCO4C1Q6ZQN7 724 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 ZBTB46Q86UZ6 589 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 NLRP8Q86W28 1048 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 HIPK1Q86Z02 1210 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 TRAPPC5Q8IUR0 188 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 BPIFB6Q8NFQ5 453 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 ZNF420Q8TAQ5 688 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 CHTF18Q8WVB6 975 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 HSH2DQ96JZ2 352 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 BRF2Q9HAW0 419 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 RAD18Q9NS91 495 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 PCDHB11Q9Y5F2 797 aa18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 PCYT1BQ9Y5K3 369 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-210ENST00000464987 NUP210Q8TEM1 1887 aaPredicted RBP18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 ABCB1P08183 1280 aaPredicted RBP18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 IDSP22304 550 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 AQP1P29972 269 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 HNRNPFP52597 415 aaKnown RBP18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 IER5LQ5T953 404 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 OR2T5Q6IEZ7 315 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 PDE12Q6L8Q7 609 aaKnown RBP18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 OR2T29Q8NH02 315 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 OTUB2Q96DC9 234 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 LRIG1Q96JA1 1093 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 FZD4Q9ULV1 537 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 DNAH14Q0VDD8 3507 aa18.02■□□□□ 0.47
TSPAN4-210ENST00000464987 GNG14A0A1W2PPG7 69 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 C1orf226A1L170 272 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 PTGES3LE9PB15 166 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 XPNPEP2O43895 674 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 SRPRAP08240 638 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 NPPBP16860 134 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 IGFBP5P24593 272 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 TTKP33981 857 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 NUP107P57740 925 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF33BQ06732 778 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 DCTN2Q13561 401 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 SIM2Q14190 667 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 CPTPQ5TA50 214 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 LAIR1Q6GTX8 287 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 DHRS4L2Q6PKH6 230 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 FKBP9P1Q75LS8 142 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 KLHDC8AQ8IYD2 350 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 SYNPOQ8N3V7 929 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF707Q96C28 371 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 DTNBP1Q96EV8 351 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 FOPNLQ96NB1 174 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 NRTNQ99748 197 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 SH3BP4Q9P0V3 963 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 CDH7Q9ULB5 785 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 MRPS23Q9Y3D9 190 aaKnown RBP18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 KCNE2Q9Y6J6 123 aa18.01■□□□□ 0.47
TSPAN4-210ENST00000464987 SLC1A7O00341 560 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 TLL1O43897 1013 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 MMP20O60882 483 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 SEC14L2O76054 403 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 MYO1DO94832 1006 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 FKBP9O95302 570 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 FABP3P05413 133 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 JUNBP17275 347 aaPredicted RBP18■□□□□ 0.47
TSPAN4-210ENST00000464987 EPHA2P29317 976 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 SKIV2LQ15477 1246 aaKnown RBP18■□□□□ 0.47
TSPAN4-210ENST00000464987 RAET1GQ6H3X3 334 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF852Q6ZMS4 543 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 CBLL1Q75N03 491 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF547Q8IVP9 402 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 OR4K1Q8NGD4 311 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 TANKQ92844 425 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 TPD52L3Q96J77 140 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 CSF3RQ99062 836 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 TUBA1CQ9BQE3 449 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 CHST8Q9H2A9 424 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 PRKAB1Q9Y478 270 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 hCG_2014768A0A024R1R8 64 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 BCKDKO14874 412 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 AXIN1O15169 862 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 SLC16A6O15403 523 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 TGFB1P01137 390 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 HSD3B1P14060 373 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 FSHRP23945 695 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 HSD3B2P26439 372 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 GALK1P51570 392 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 C21orf58P58505 322 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 ST8SIA6P61647 398 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 MC1RQ01726 317 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 NUMA1Q14980 2115 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 DDX59Q5T1V6 619 aaKnown RBP eCLIP18■□□□□ 0.475e-6■■■■□ 22.8
TSPAN4-210ENST00000464987 C12orf76Q8N812 135 aaPredicted RBP18■□□□□ 0.47
TSPAN4-210ENST00000464987 EZH1Q92800 747 aaPredicted RBP18■□□□□ 0.47
TSPAN4-210ENST00000464987 BADQ92934 168 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 RIBC2Q9H4K1 309 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 C2orf16Q68DN1 1984 aa18■□□□□ 0.47
TSPAN4-210ENST00000464987 PCDH7O60245 1069 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 XYLBO75191 536 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF182P17025 639 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 ZNF8P17098 575 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 NR4A1P22736 598 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 GSTM2P28161 218 aa17.99■□□□□ 0.47
TSPAN4-210ENST00000464987 TIA1P31483 386 aaKnown RBP eCLIP17.99■□□□□ 0.471e-7■□□□□ 8.4
TSPAN4-210ENST00000464987 CLK3P49761 638 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms