RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 MTRF1LQ9UGC7 380 aaKnown RBP8.82□□□□□ -1
APP-213ENST00000464867 CRLS1Q9UJA2 301 aa8.82□□□□□ -1
APP-213ENST00000464867 TGP01266 2768 aa8.81□□□□□ -1
APP-213ENST00000464867 IGHV3-20A0A0C4DH32 117 aa8.81□□□□□ -1
APP-213ENST00000464867 OR14I1A6ND48 311 aa8.81□□□□□ -1
APP-213ENST00000464867 TMCO5BA8MYB1 307 aa8.81□□□□□ -1
APP-213ENST00000464867 TARM1B6A8C7 271 aa8.81□□□□□ -1
APP-213ENST00000464867 DVL2O14641 736 aa8.81□□□□□ -1
APP-213ENST00000464867 NDC80O14777 642 aa8.81□□□□□ -1
APP-213ENST00000464867 FFAR3O14843 346 aa8.81□□□□□ -1
APP-213ENST00000464867 GPR42O15529 346 aa8.81□□□□□ -1
APP-213ENST00000464867 SPRY1O43609 319 aaPredicted RBP8.81□□□□□ -1
APP-213ENST00000464867 SIX3O95343 332 aaPredicted RBP8.81□□□□□ -1
APP-213ENST00000464867 CNOT4O95628 575 aaKnown RBP8.81□□□□□ -1
APP-213ENST00000464867 AP2A1O95782 977 aa8.81□□□□□ -1
APP-213ENST00000464867 GSTM1P09488 218 aa8.81□□□□□ -1
APP-213ENST00000464867 CCDC172P0C7W6 258 aa8.81□□□□□ -1
APP-213ENST00000464867 ATP1B2P14415 290 aaPredicted RBP8.81□□□□□ -1
APP-213ENST00000464867 ASCL1P50553 236 aa8.81□□□□□ -1
APP-213ENST00000464867 JAM2P57087 298 aa8.81□□□□□ -1
APP-213ENST00000464867 GSTM4Q03013 218 aa8.81□□□□□ -1
APP-213ENST00000464867 MESDQ14696 234 aa8.81□□□□□ -1
APP-213ENST00000464867 SLC14A2Q15849 920 aa8.81□□□□□ -1
APP-213ENST00000464867 CHRFAM7AQ494W8 412 aa8.81□□□□□ -1
APP-213ENST00000464867 NCBP2-AS2Q69YL0 99 aa8.81□□□□□ -1
APP-213ENST00000464867 HIPK1Q86Z02 1210 aa8.81□□□□□ -1
APP-213ENST00000464867 ULK2Q8IYT8 1036 aa8.81□□□□□ -1
APP-213ENST00000464867 CNTD1Q8N815 330 aa8.81□□□□□ -1
APP-213ENST00000464867 OR5K2Q8NHB8 316 aa8.81□□□□□ -1
APP-213ENST00000464867 C16orf52Q8NHV5 167 aa8.81□□□□□ -1
APP-213ENST00000464867 ULK4Q96C45 1275 aa8.81□□□□□ -1
APP-213ENST00000464867 PERPQ96FX8 193 aa8.81□□□□□ -1
APP-213ENST00000464867 COPS8Q99627 209 aa8.81□□□□□ -1
APP-213ENST00000464867 ZFYVE21Q9BQ24 234 aa8.81□□□□□ -1
APP-213ENST00000464867 DEFB127Q9H1M4 99 aa8.81□□□□□ -1
APP-213ENST00000464867 CDCP1Q9H5V8 836 aa8.81□□□□□ -1
APP-213ENST00000464867 MRPL47Q9HD33 250 aaKnown RBP8.81□□□□□ -1
APP-213ENST00000464867 MMP25Q9NPA2 562 aa8.81□□□□□ -1
APP-213ENST00000464867 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
APP-213ENST00000464867 PLAGL1Q9UM63 463 aa8.81□□□□□ -1
APP-213ENST00000464867 HIF3AQ9Y2N7 669 aa8.81□□□□□ -1
APP-213ENST00000464867 SCINQ9Y6U3 715 aa8.81□□□□□ -1
APP-213ENST00000464867 PKD1L1Q8TDX9 2849 aa8.81□□□□□ -1
APP-213ENST00000464867 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.8□□□□□ -1
APP-213ENST00000464867 HSPB2A8KAH6 182 aa8.8□□□□□ -1
APP-213ENST00000464867 BUD23O43709 281 aaKnown RBP8.8□□□□□ -1
APP-213ENST00000464867 SGTAO43765 313 aa8.8□□□□□ -1
APP-213ENST00000464867 PEX1O43933 1283 aa8.8□□□□□ -1
APP-213ENST00000464867 WDR1O75083 606 aa8.8□□□□□ -1
APP-213ENST00000464867 SRP72O76094 671 aaKnown RBP8.8□□□□□ -1
APP-213ENST00000464867 FKBP9O95302 570 aa8.8□□□□□ -1
APP-213ENST00000464867 CYC1P08574 325 aa8.8□□□□□ -1
APP-213ENST00000464867 PEBP1P30086 187 aaKnown RBP8.8□□□□□ -1
APP-213ENST00000464867 SSR1P43307 286 aaKnown RBP8.8□□□□□ -1
APP-213ENST00000464867 IFI35P80217 286 aaPredicted RBP8.8□□□□□ -1
APP-213ENST00000464867 ACTN3Q08043 901 aaPredicted RBP8.8□□□□□ -1
APP-213ENST00000464867 POU4F3Q15319 338 aa8.8□□□□□ -1
APP-213ENST00000464867 HSPB2Q16082 182 aa8.8□□□□□ -1
APP-213ENST00000464867 MINDY4Q4G0A6 757 aa8.8□□□□□ -1
APP-213ENST00000464867 RPS19BP1Q86WX3 136 aaKnown RBP8.8□□□□□ -1
APP-213ENST00000464867 SULF2Q8IWU5 870 aa8.8□□□□□ -1
APP-213ENST00000464867 AMER2Q8N7J2 671 aa8.8□□□□□ -1
APP-213ENST00000464867 OR52N2Q8NGI0 321 aa8.8□□□□□ -1
APP-213ENST00000464867 TCF12Q99081 682 aa8.8□□□□□ -1
APP-213ENST00000464867 CYTH2Q99418 400 aa8.8□□□□□ -1
APP-213ENST00000464867 TRIM7Q9C029 511 aa8.8□□□□□ -1
APP-213ENST00000464867 GANQ9H2C0 597 aa8.8□□□□□ -1
APP-213ENST00000464867 ALKBH4Q9NXW9 302 aa8.8□□□□□ -1
APP-213ENST00000464867 ARHGAP21Q5T5U3 1957 aa8.8□□□□□ -1
APP-213ENST00000464867 ANK2Q01484 3957 aa8.79□□□□□ -1
APP-213ENST00000464867 A0A0J9YVX5 310 aa8.79□□□□□ -1
APP-213ENST00000464867 SOWAHDA6NJG2 315 aa8.79□□□□□ -1
APP-213ENST00000464867 C2orf81A6NN90 581 aa8.79□□□□□ -1
APP-213ENST00000464867 ACOT7O00154 380 aa8.79□□□□□ -1
APP-213ENST00000464867 FCHO1O14526 889 aa8.79□□□□□ -1
APP-213ENST00000464867 LIN7AO14910 233 aaPredicted RBP8.79□□□□□ -1
APP-213ENST00000464867 FPR1P21462 350 aa8.79□□□□□ -1
APP-213ENST00000464867 CD9P21926 228 aa8.79□□□□□ -1
APP-213ENST00000464867 SLC26A3P40879 764 aa8.79□□□□□ -1
APP-213ENST00000464867 AGTR2P50052 363 aa8.79□□□□□ -1
APP-213ENST00000464867 ITGA8P53708 1063 aa8.79□□□□□ -1
APP-213ENST00000464867 ZBTB17Q13105 803 aa8.79□□□□□ -1
APP-213ENST00000464867 PIGHQ14442 188 aaPredicted RBP8.79□□□□□ -1
APP-213ENST00000464867 SPRED3Q2MJR0 410 aa8.79□□□□□ -1
APP-213ENST00000464867 C1orf185Q5T7R7 199 aa8.79□□□□□ -1
APP-213ENST00000464867 RIPPLY2Q5TAB7 128 aa8.79□□□□□ -1
APP-213ENST00000464867 FRMPD2BQ6IN97 320 aa8.79□□□□□ -1
APP-213ENST00000464867 MAP7D3Q8IWC1 876 aa8.79□□□□□ -1
APP-213ENST00000464867 HSCBQ8IWL3 235 aa8.79□□□□□ -1
APP-213ENST00000464867 GALNT12Q8IXK2 581 aa8.79□□□□□ -1
APP-213ENST00000464867 SLC25A41Q8N5S1 370 aa8.79□□□□□ -1
APP-213ENST00000464867 C2orf73Q8N5S3 287 aaPredicted RBP8.79□□□□□ -1
APP-213ENST00000464867 ZFP62Q8NB50 900 aaPredicted RBP8.79□□□□□ -1
APP-213ENST00000464867 KCTD6Q8NC69 237 aa8.79□□□□□ -1
APP-213ENST00000464867 SPATA22Q8NHS9 363 aa8.79□□□□□ -1
APP-213ENST00000464867 SMC6Q96SB8 1091 aa8.79□□□□□ -1
APP-213ENST00000464867 LPAR4Q99677 370 aa8.79□□□□□ -1
APP-213ENST00000464867 CCL19Q99731 98 aa8.79□□□□□ -1
APP-213ENST00000464867 NPAS2Q99743 824 aa8.79□□□□□ -1
APP-213ENST00000464867 KRTAP4-12Q9BQ66 201 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms