RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 DNASE1L2Q92874 299 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 APOPT1Q96IL0 206 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 ELMO2Q96JJ3 720 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 CABS1Q96KC9 395 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SNX22Q96L94 193 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PAIP2Q9BPZ3 127 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 IQCGQ9H095 443 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 CAB39LQ9H9S4 337 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 MLXIPLQ9NP71 852 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PRSS16Q9NQE7 514 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SNX15Q9NRS6 342 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 HEBP1Q9NRV9 189 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 INTS10Q9NVR2 710 aaKnown RBP7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PSD3Q9NYI0 1048 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 APPL1Q9UKG1 709 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 TLK1Q9UKI8 766 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 SARDHQ9UL12 918 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 STON1Q9Y6Q2 735 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 PIAS3Q9Y6X2 628 aa7.19□□□□□ -1.26
UBE4B-204ENST00000462658 WDFY4Q6ZS81 3184 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 MYO15AQ9UKN7 3530 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 A0A096LPK6 155 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GLYATL1P3A0A0U1RQE8 302 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 RAB27BO00194 218 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TM9SF1O15321 606 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 SYNCRIPO60506 623 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 SHOX2O60902 331 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 RNASEH1O60930 286 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 SRP72O76094 671 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 EGFP01133 1207 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 MT-ND5P03915 603 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 C2P06681 752 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GLULP15104 373 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 STMN1P16949 149 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 ZNF30P17039 623 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 DRD1P21728 446 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 LHCGRP22888 699 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 CRABP2P29373 138 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PPARGP37231 505 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 SPAM1P38567 509 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 MAGEA12P43365 314 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TTPAP49638 278 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 STC1P52823 247 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PRKAG1P54619 331 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 SLC12A2P55011 1212 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 MRPS35P82673 323 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 IL9RQ01113 521 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 CACNG1Q06432 222 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GABPB1Q06547 395 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 DPTQ07507 201 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GRSF1Q12849 480 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PDE1CQ14123 709 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TBCCQ15814 346 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 INSCQ1MX18 579 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TYSND1Q2T9J0 566 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TMEM196Q5HYL7 178 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 AARS2Q5JTZ9 985 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 HHATQ5VTY9 493 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 FAM46CQ5VWP2 391 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 ZDHHC20Q5W0Z9 365 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 KIAA0895LQ68EN5 471 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 LVRNQ6Q4G3 990 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 FAM151BQ6UXP7 276 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 CDHR3Q6ZTQ4 885 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 RAPH1Q70E73 1250 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 DPPA4Q7L190 304 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PARS2Q7L3T8 475 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 MMAAQ8IVH4 418 aaKnown RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PIANPQ8IYJ0 282 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GPR26Q8NDV2 337 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GDAP1Q8TB36 358 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 ACTRT2Q8TDY3 377 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TMEM171Q8WVE6 324 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 DYDC1Q8WWB3 177 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 FKBP10Q96AY3 582 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 ARRDC3Q96B67 414 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 ERLEC1Q96DZ1 483 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PPP1R16AQ96I34 528 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 OMDQ99983 421 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TOR3AQ9H497 397 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 FAM96AQ9H5X1 160 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 IL26Q9NPH9 171 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 DYRK4Q9NR20 520 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 KLC4Q9NSK0 619 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 TBC1D23Q9NUY8 699 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PKD2L2Q9NZM6 624 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 SLC17A7Q9P2U7 560 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 LRIT1Q9P2V4 623 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 DCDC2Q9UHG0 476 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PACSIN3Q9UKS6 424 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 GRID1Q9ULK0 1009 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 CORO1CQ9ULV4 474 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-204ENST00000462658 CRYL1Q9Y2S2 319 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 PLLPQ9Y342 182 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 ZNF318Q5VUA4 2279 aa7.18□□□□□ -1.26
UBE4B-204ENST00000462658 MYLKQ15746 1914 aa7.17□□□□□ -1.26
UBE4B-204ENST00000462658 A0A087X1B8 175 aa7.17□□□□□ -1.26
UBE4B-204ENST00000462658 GAPDHSO14556 408 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-204ENST00000462658 MPPED1O15442 326 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms