RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 TBC1D3Q8IZP1 549 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-204ENST00000460696 SLC34A3Q8N130 599 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 POC5Q8NA72 575 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 FAM110BQ8TC76 370 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 GLYATL1Q969I3 302 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 NUS1Q96E22 293 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 PCDHGB3Q9Y5G1 929 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 HEMK1Q9Y5R4 338 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-204ENST00000460696 A0A096LPI6 279 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 ABCB7O75027 752 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 MITFO75030 526 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-204ENST00000460696 SLC16A8O95907 504 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 FSHRP23945 695 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 IL12AP29459 219 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 HLA-FP30511 346 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 MRPL58Q14197 206 aaKnown RBP11.26□□□□□ -0.61
NPHP4-204ENST00000460696 CARTPTQ16568 116 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 UGT3A2Q3SY77 523 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 C9orf64Q5T6V5 341 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 IER5LQ5T953 404 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 ATG9BQ674R7 924 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 ANKRD33Q7Z3H0 272 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 NPAS3Q8IXF0 933 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 LMNTD1Q8N9Z9 388 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 GOLM1Q8NBJ4 401 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 IL17FQ96PD4 163 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 PKP4Q99569 1192 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 EFCAB11Q9BUY7 163 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 ACPTQ9BZG2 426 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 PDFQ9HBH1 243 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 SELENONQ9NZV5 590 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 ERVW-1Q9UQF0 538 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
NPHP4-204ENST00000460696 EFCAB10A6NFE3 127 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 OR7A17O14581 309 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 SERPINB7O75635 380 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 C6orf47O95873 294 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ADH5P11766 374 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 HOXB6P17509 224 aaKnown RBP11.25□□□□□ -0.61
NPHP4-204ENST00000460696 JAK1P23458 1154 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TACR1P25103 407 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ACVR1Q04771 509 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ZNF846Q147U1 533 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 SLC14A2Q15849 920 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.25□□□□□ -0.61
NPHP4-204ENST00000460696 HMBOX1Q6NT76 420 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 MACC1Q6ZN28 852 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TICAM1Q8IUC6 712 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 OR10G2Q8NGC3 310 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FATE1Q969F0 183 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TRIB3Q96RU7 358 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FNDC11Q9BVV2 318 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FAIM2Q9BWQ8 316 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FAM120CQ9NX05 1096 aaKnown RBP11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TAC3Q9UHF0 121 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 PSME2Q9UL46 239 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 PCDHA9Q9Y5H5 950 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 SLC31A1O15431 190 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 GADD45GO95257 159 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FGF19O95750 216 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 LAMP1P11279 417 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ACADMP11310 421 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 VIPR2P41587 438 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 MADCAM1Q13477 382 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 SCARB2Q14108 478 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 GRIN2CQ14957 1233 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 LPAL2Q16609 132 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 CEP68Q76N32 757 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 LGI4Q8N135 537 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 MAL2Q969L2 176 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 P2RY13Q9BPV8 354 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TUBA8Q9NY65 449 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-204ENST00000460696 CLEC4EQ9ULY5 219 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ERGIC3Q9Y282 383 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 SNTNA6NMZ2 147 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 E7EQ34 232 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 H0YAE9 185 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 PLK4O00444 970 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 BMP10O95393 424 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 LATS1O95835 1130 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ACP5P13686 325 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 MYL12AP19105 171 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 FPR1P21462 350 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 HOXC8P31273 242 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 UGT2B15P54855 530 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TGM3Q08188 693 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 PRAMEF14Q5SWL7 426 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 PRAMEF13Q5VWM6 474 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 PDPRQ8NCN5 879 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 OR14C36Q8NHC7 312 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 NFKBIDQ8NI38 313 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TFGQ92734 400 aaPredicted RBP11.25□□□□□ -0.61
NPHP4-204ENST00000460696 GTF2H4Q92759 462 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 ZNF607Q96SK3 696 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 SLC12A9Q9BXP2 914 aa11.25□□□□□ -0.61
NPHP4-204ENST00000460696 HEBP1Q9NRV9 189 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms